Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.313236	5730427N09Rik	RIKEN cDNA 5730427N09 gene	13		59050
Gene Ontology	intracellular | nucleus | protein biosynthesis | ribosome | structural constituent of ribosome
Human Homolog	TINP1[TGF beta-inducible nuclear protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 93 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACGTTCAAA (3) CCATTTGATT GGAAAAAAAA (2) TGCAGTCATC (2) TTAATAAAAT (3) 39.2 0.0392 Cb medulloblastoma GGAAAAAAAA (2) TGCAGTCATC (2) 46.2 0.0462 P8 GC+1d culture ATGACAGCCG ATTAAGCAGA (3) CCATTTGATT GCACACACTC (2) GGAAAAAAAA (2) TGCAGTCATC (2) TTAATAAAAT (3) 24.9 0.0249 P8 GC+SHH+1d culture CCATTTGATT GGAAAAAAAA (2) TCACACACCC TGCAGTCATC (2) TTAATAAAAT (3) 41 0.041 3T3 fibroblasts TGCAGTCATC (2) 17.5 0.0175 E15 cortex CCATTTGATT GGAAAAAAAA (2) 14.8 0.0148 P1 cortex GGAAAAAAAA (2) TGCAGTCATC (2) TTAATAAAAT (3) 13.5 0.0135 Hypothalamus GGAAAAAAAA (2) TGCAGTCATC (2) TTAATAAAAT (3) 32.6 0.0326 E12.5 retina AATGCAACTC ACTTTTTAGT CCATTTGATT GCACACACTC (2) GGAAAAAAAA (2) TCACACACCC TGCAGTCATC (2) TTAATAAAAT (3) 60.2 0.0602 E14.5 retina CCATTTGATT GGAAAAAAAA (2) TCACACACCC TGCAGTCATC (2) TTAATAAAAT (3) 40 0.04 E16.5 retina AACGTTCAAA (3) ACTTTTTAGT ATGACAGCCG CCATTTGATT GGAAAAAAAA (2) TGCAGTCATC (2) TTAATAAAAT (3) 32.5 0.0325 E18.5 retina AACGTTCAAA (3) CCATTTGATT GCACACACTC (2) GGAAAAAAAA (2) TGCAGTCATC (2) TTAATAAAAT (3) 65.5 0.0655 P0.5 retina AATGCAACTC CCATTTGATT GGAAAAAAAA (2) TGCAGTCATC (2) TTAATAAAAT (3) 33.4 0.0334 P2.5 retina AACGTTCAAA (3) CCATTTGATT GGAAAAAAAA (2) TGCAGTCATC (2) TTAATAAAAT (3) 45.7 0.0457 P4.5 retina ACTTTTTAGT CCATTTGATT GCACACACTC (2) GGAAAAAAAA (2) TGCAGTCATC (2) TTAATAAAAT (3) 59.5 0.0595 P6.5 retina ATGACAGCCG ATTAAGCAGA (3) CCATTTGATT GGAAAAAAAA (2) TGCAGTCATC (2) TTAATAAAAT (3) 38.4 0.0384 P10.5 crx- retina CCATTTGATT GCACACACTC (2) GGAAAAAAAA (2) TGCAGTCATC (2) TTAATAAAAT (3) 37.1 0.0371 P10.5 crx+ retina CCATTTGATT GGAAAAAAAA (2) TGCAGTCATC (2) TTAATAAAAT (3) 30.7 0.0307 Adult retinal AATGCAACTC GGAAAAAAAA (2) TGCAGTCATC (2) 9.4 0.0094 ONL ATTAAGCAGA (3) CCATTTGATT GGAAAAAAAA (2) TGCAGTCATC (2) TTAATAAAAT (3) 26.7 0.0267