| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CCGTGGGCAT GCCTAATGTA GCTTAATGTA (2)
| 234.9 | 0.2349 |
| Cb medulloblastoma | CCGTGGGCAT GCCTAATGTA GCTTAATGTA (2)
| 76.2 | 0.0762 |
| P8 GC+1d culture | CCGTGGGCAT GCCTAATGTA GCTTAATGTA (2)
| 227.1 | 0.2271 |
| P8 GC+SHH+1d culture | CCGTGGGCAT GCCTAATGTA
| 208.5 | 0.2085 |
| 3T3 fibroblasts | CCGTGGGCAT GCCTAATGTA
| 84.1 | 0.0841 |
| E15 cortex | CCGTGGGCAT GCCTAATGTA
| 24.7 | 0.0247 |
| P1 cortex | CCGTGGGCAT GCCTAATGTA
| 81.8 | 0.0818 |
| Hypothalamus | CCGTGGGCAT CTGGGTGACA (2) GCCTAATGTA
| 228.2 | 0.2282 |
| E12.5 retina | CCGTGGGCAT GCCTAATGTA
| 405.5 | 0.4055 |
| E14.5 retina | CCGTGGGCAT GCCTAATGTA GCTTAATGTA (2)
| 306 | 0.306 |
| E16.5 retina | CCGTGGGCAT GCCTAATGTA
| 284.3 | 0.2843 |
| E18.5 retina | CCGTGGGCAT GCCTAATGTA
| 283.7 | 0.2837 |
| P0.5 retina | CCGTGGGCAT GCCTAATGTA GCTTAATGTA (2)
| 162.9 | 0.1629 |
| P2.5 retina | GCCTAATGTA GCTTAATGTA (2)
| 249.9 | 0.2499 |
| P4.5 retina | CCGTGGGCAT GCCTAATGTA
| 261.5 | 0.2615 |
| P6.5 retina | CCGTGGGCAT GCCTAATGTA GCTTAATGTA (2)
| 180.1 | 0.1801 |
| P10.5 crx- retina | CCGTGGGCAT GCCTAATGTA GCTTAATGTA (2)
| 118.9 | 0.1189 |
| P10.5 crx+ retina | CTGGGTGACA (2) GCCTAATGTA GCTTAATGTA (2)
| 151.8 | 0.1518 |
| Adult retinal | CTGGGTGACA (2) GCCTAATGTA
| 87.1 | 0.0871 |
| ONL | CTGGGTGACA (2) GCCTAATGTA
| 65.1 | 0.0651 |