Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.318364
D4Ertd639e
DNA segment, Chr 4, ERATO Doi 639, expressed
4
4 54.4 cM
52415
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 33 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ACTGTCTCCC
TCTTCTGCCT (
5
)
TGCCGCCTGT
(
3
)
TTTATTGCAG (
2
)
14.7
0.0147
Cb medulloblastoma
CTTATGCAGG (
2
)
TCTTCTGCCT (
5
)
TTTATTGCAG (
2
)
9.2
0.0092
P8 GC+1d culture
ACTGTCTCCC
TGCCGCCTGT
(
3
)
7.9
0.0079
P8 GC+SHH+1d culture
ACTGTCTCCC
TCTTCTGCCT (
5
)
TGCCGCCTGT
(
3
)
17.6
0.0176
3T3 fibroblasts
TCTTCTGCCT (
5
)
TGCCGCCTGT
(
3
)
21
0.021
E15 cortex
TGCCGCCTGT
(
3
)
4.9
0.0049
P1 cortex
CTTATGCAGG (
2
)
TTTATTGCAG (
2
)
13.6
0.0136
E12.5 retina
ACTGTCTCCC
TCTTCTGCCT (
5
)
TGCCGCCTGT
(
3
)
11.3
0.0113
E14.5 retina
TGCCGCCTGT
(
3
)
10.9
0.0109
E16.5 retina
TCTTCTGCCT (
5
)
TGCCGCCTGT
(
3
)
9
0.009
P0.5 retina
TCTTCTGCCT (
5
)
2
0.002
P2.5 retina
TGCCGCCTGT
(
3
)
5.3
0.0053
P4.5 retina
TGCCGCCTGT
(
3
)
4
0.004
P6.5 retina
ACTGTCTCCC
CTTATGCAGG (
2
)
6.7
0.0067
P10.5 crx- retina
ACTGTCTCCC
5.6
0.0056
P10.5 crx+ retina
ACTGTCTCCC
TGCCGCCTGT
(
3
)
5.7
0.0057
Adult retinal
ACTGTCTCCC
1.9
0.0019
ONL
TTTATTGCAG (
2
)
3.8
0.0038
