| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TAGCCTGCCT (2) TTCAGTGGGA
| 9.8 | 0.0098 |
| Cb medulloblastoma | AAGCTGTTTC (2) CAGGTCTGTG (2) TTCAGTGGGA
| 13.8 | 0.0138 |
| P8 GC+1d culture | AAGCTGTTTT (2) CAGGTCTGTG (2) TAATTCTAAT (3)
| 5.7 | 0.0057 |
| P8 GC+SHH+1d culture | AAGCTGTTTT (2) CAGGTCTGTG (2) CTGCAGCAGA GAGCAAATAA (3) TAGCCTGCCT (2)
| 11.8 | 0.0118 |
| 3T3 fibroblasts | AAGCTGTTTT (2)
| 3.5 | 0.0035 |
| E15 cortex | TAGCCTGCCT (2)
| 4.9 | 0.0049 |
| Hypothalamus | CAGGTCTGTG (2) TAATTCTAAT (3) TTCAGTGGGA
| 5.4 | 0.0054 |
| E12.5 retina | CAGGTCTGTG (2) TAGCCTGCCT (2)
| 3.8 | 0.0038 |
| E14.5 retina | AAGCTGTTTT (2) CAGGTCTGTG (2) TAGCCTGCCT (2)
| 7.2 | 0.0072 |
| E16.5 retina | AAGCTGTTTT (2) GAGCAAATAA (3) TAATTCTAAT (3) TAGCCTGCCT (2)
| 12.6 | 0.0126 |
| E18.5 retina | CAGGTCTGTG (2) GAGCAAATAA (3) TAGCCTGCCT (2)
| 9.1 | 0.0091 |
| P0.5 retina | AAGCTGTTTC (2) AAGCTGTTTT (2)
| 4 | 0.004 |
| P2.5 retina | CAGGTCTGTG (2) TAGCCTGCCT (2)
| 5.3 | 0.0053 |
| P4.5 retina | AAGCTGTTTT (2) TAGCCTGCCT (2)
| 4 | 0.004 |
| P6.5 retina | AAGCTGTTTC (2) CAGGTCTGTG (2) CTGCAGCAGA
| 5.1 | 0.0051 |
| P10.5 crx- retina | AAGCTGTTTT (2) CTGCAGCAGA
| 7.4 | 0.0074 |
| P10.5 crx+ retina | AAGCTGTTTT (2) CAGGTCTGTG (2) TAATTCTAAT (3)
| 9.5 | 0.0095 |
| Adult retinal | AAGCTGTTTC (2) CTGCAGCAGA TAATTCTAAT (3)
| 11.2 | 0.0112 |
| ONL | CTGCAGCAGA TAATTCTAAT (3)
| 3.8 | 0.0038 |