Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.319660	Hmgn2	high mobility group nucleosomal binding domain 2	4	4 D3 (4 62.2 cM)	15331
Gene Ontology	chromatin | DNA binding | DNA packaging | nucleus
Human Homolog	HMGN2[high-mobility group nucleosomal binding domain 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 8 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 133 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATCCTTCCCC (2) ATCGTTTATG ATTGGTTATG ATTGTTTATG (3) CCCAAAAGAA GGCAGACAAT TGTCAGTAAC 194.2 0.1942 Cb medulloblastoma ATTGTTTATG (3) CCAAAAGAAA GCCTCTGCTG (2) GGCAGACAAT 18.4 0.0184 P8 GC+1d culture ATCCTTCCCC (2) ATTGTTTATG (3) CCCAAAAGAA GCCTCTGCTG (2) GGCAGACAAT TGTCAGTAAC 107.2 0.1072 P8 GC+SHH+1d culture ATCCTTCCCC (2) ATTGTTTATG (3) CCCAAAAAAA (2) CCCAAAAGAA GCTATTACAA (2) GGCAGACAAT TCCTGCCTGA TGTCAGTAAC 234.1 0.2341 3T3 fibroblasts ATTGTTTATG (3) GGCAGACAAT 14 0.014 E15 cortex ATTGGTTATG ATTGTTTATG (3) CCCAAAAAAA (2) TCCTGCCTGA TGTCAGTAAC 34.5 0.0345 P1 cortex ATTGTTTATG (3) CCCAAAAGAA GCCTCTGCTG (2) GCTATTACAA (2) 36.2 0.0362 Hypothalamus ATTGTTTATG (3) GCCTCTGCTG (2) GTATTTCAGG TGTCAGTAAC 19.9 0.0199 E12.5 retina ATCCTTCCCC (2) ATTGGTTATG ATTGTTTATG (3) CCCAAAAGAA GGCAGACAAT GTATTTCAGG TGTCAGTAAC 193.5 0.1935 E14.5 retina ATCCTTCCCC (2) ATTGGTTATG ATTGTTTATG (3) CCCAAAAGAA GGCAGACAAT GTATTTCAGG 265.9 0.2659 E16.5 retina ATCCTTCCCC (2) ATCGTTTATG ATTGGTTATG ATTGTTTATG (3) CCCAAAAAAA (2) GGCAGACAAT TCCTGCCTGA TGTCAGTAAC 206.3 0.2063 E18.5 retina ATCCTTCCCC (2) ATCGTTTATG ATTGGTTATG ATTGTTTATG (3) CCCAAAAAAA (2) GCCTCTGCTG (2) GGCAGACAAT GTATTTCAGG TCCTGCCTGA 416.5 0.4165 P0.5 retina ATCCTTCCCC (2) ATTGGTTATG ATTGTTTATG (3) CCCAAAAAAA (2) CCCAAAAGAA GGCAGACAAT TGTCAGTAAC 267 0.267 P2.5 retina ATCCTTCCCC (2) ATCGTTTATG ATTGGTTATG ATTGTTTATG (3) CCCAAAAAAA (2) CCCAAAAGAA GGCAGACAAT TCCTGCCTGA 385.5 0.3855 P4.5 retina ATCCTTCCCC (2) ATTGGTTATG ATTGTTTATG (3) CCCAAAAAAA (2) GCTATTACAA (2) GGCAGACAAT GTATTTCAGG 459.6 0.4596 P6.5 retina ATCCTTCCCC (2) ATTGGTTATG ATTGTTTATG (3) CCCAAAAAAA (2) CCCAAAAGAA GCCTCTGCTG (2) GCTATTACAA (2) GGCAGACAAA GGCAGACAAT TCCTGCCTGA TGTCAGTAAC 506.9 0.5069 P10.5 crx- retina ATCCTTCCCC (2) ATTGGTTATG ATTGTTTATG (3) CCCAAAAGAA GCCTCTGCTG (2) GGCAGACAAT TGTCAGTAAC 210 0.21 P10.5 crx+ retina ATCCTTCCCC (2) ATTGTTTATG (3) CCCAAAAGAA GCCTCTGCTG (2) GGCAGACAAA GGCAGACAAT GTATTTCAGG TCCTGCCTGA TGTCAGTAAC 236.4 0.2364 Adult retinal ATCCTTCCCC (2) ATTGTTTATG (3) CCCAAAAAAA (2) CCCAAAAGAA GCCTCTGCTG (2) GGCAGACAAT TGTCAGTAAC 54 0.054 ONL ATCCTTCCCC (2) ATCGTTTATG ATTGTTTATG (3) CCCAAAAAAA (2) CCCAAAAGAA GGCAGACAAT TCCTGCCTGA 120.6 0.1206