Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3217	Ass1	argininosuccinate synthetase 1	2	2 20.0 cM	11898
Gene Ontology	arginine biosynthesis | argininosuccinate synthase activity | ATP binding | ligase activity | urea cycle
Human Homolog	ASS[argininosuccinate synthetase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 133 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGAGGCTGG (2) CAATAGAGAC GAAAGGAAAC GGGAGGGAGG (3) GGTGGGGGGG (2) TTCTCTGCCA (3) 45.6 0.0456 Cb medulloblastoma CAATAGAGAC GAAAGGAAAC GCACCATCAG GCCGCCTGGG (3) GGCGACAAGC GGTGGGGGGG (2) 46.2 0.0462 P8 GC+1d culture CAATAGAGAC CAGATCAGCT GAAAGGAAAC GCCGCCTGGG (3) GGCGACAAGC GGGAGGGAGG (3) GGTGGGGGGG (2) TAACCTGAAA 66.1 0.0661 P8 GC+SHH+1d culture ATGAGGCTGG (2) CAATAGAGAC GAAAGGAAAC GCCGCCTGGG (3) GGCGACAAGC GGGAGGGAGG (3) GGTGGGGGGG (2) TTCTCTGCCA (3) 61.1 0.0611 3T3 fibroblasts AACGTGCAGG CAATAGAGAC CAGATCAGCT GAAAGGAAAC GCACCATCAG GCCGCCTGGG (3) GGTGGGGGGG (2) 101.6 0.1016 E15 cortex GCACCATCAG GGGAGGGAGG (3) GGTGGGGGGG (2) 59.3 0.0593 P1 cortex AGAAGCAGGT (2) CAATAGAGAC CAGATCAGCT GCCGCCTGGG (3) GGTGGGGGGG (2) 49.9 0.0499 Hypothalamus AACGTGCAGG CAATAGAGAC GCACCATCAG GGGAGGGAGG (3) GGTGGGGGGG (2) 32.6 0.0326 E12.5 retina AACGTGCAGG CAATAGAGAC CAGATCAGCT GAAAGGAAAC GGGAGGGAGG (3) GGTGGGGGGG (2) TAACCTGAAA 105.2 0.1052 E14.5 retina AACGTGCAGG CAATAGAGAC GAAAGGAAAC GGGAGGGAGG (3) GGGGCTTGCC (2) GGTGGGGGGG (2) 40 0.04 E16.5 retina AACGTGCAGG CAATAGAGAC GAAAGGAAAC GCACCATCAG GGGGCTTGCC (2) GGTGGGGGGG (2) 83.2 0.0832 E18.5 retina CAATAGAGAC GAAAGGAAAC GGTGGGGGGG (2) TAACCTGAAA 60 0.06 P0.5 retina AACGTGCAGG AGAAGCAGGT (2) ATGAGGCTGG (2) CAATAGAGAC CAGATCAGCT GAAAGGAAAC GGCGACAAGC GGTGGGGGGG (2) 115.9 0.1159 P2.5 retina AACGTGCAGG ATGAGGCTGG (2) CAATAGAGAC GAAAGGAAAC GGCGACAAGC GGGAGGGAGG (3) GGTGGGGGGG (2) TTCTCTGCCA (3) 100.4 0.1004 P4.5 retina AACGTGCAGG CAATAGAGAC GAAAGGAAAC GCACCATCAG GCCGCCTGGG (3) GGGAGGGAGG (3) GGTCCCTGTG GGTGGGGGGG (2) TTCTCTGCCA (3) 61.6 0.0616 P6.5 retina AACGTGCAGG CAATAGAGAC CAGATCAGCT GAAAGGAAAC GCACCATCAG GGCGACAAGC GGTGGGGGGG (2) TAACCTGAAA TTCTCTGCCA (3) 78.5 0.0785 P10.5 crx- retina AACGTGCAGG ATGAGGCTGG (2) CAATAGAGAC GAAAGGAAAC GCCGCCTGGG (3) GGTGGGGGGG (2) 37.2 0.0372 P10.5 crx+ retina AACGTGCAGG CAATAGAGAC GAAAGGAAAC GCCGCCTGGG (3) GGGAGGGAGG (3) GGTGGGGGGG (2) 55.6 0.0556 Adult retinal AACGTGCAGG CAATAGAGAC CAGATCAGCT GCCGCCTGGG (3) GGCGACAAGC GGGGCTTGCC (2) GGTGGGGGGG (2) TAACCTGAAA 140.9 0.1409 ONL CAATAGAGAC GAAAGGAAAC GCCGCCTGGG (3) GGGAGGGAGG (3) GGGGCTTGCC (2) GGTCCCTGTG GGTGGGGGGG (2) TAACCTGAAA 93.7 0.0937