Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]
Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24

 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.321828 Pabpc1poly A binding protein, cytoplasmic 1 15    18458 
 Gene Ontology RNA binding
 Human Homolog PABPC1[poly(A) binding protein, cytoplasmic 1] | PABPC1[poly(A) binding protein, cytoplasmic 1]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 123 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCAAGATGCGCA (2)
ACAACATATT
CCAGGTGTAG (2)
CTCGAGTCTC (3)
GCAGCTATCC (3)
GGGATTGCTT
GTTACATCAA
TAAGGTGGTT
61.90.0619
Cb medulloblastomaGGGTAGCTGG
GTTACATCAA
TGAAATAATT (2)
TGTCTTAAAA
9.20.0092
P8 GC+1d cultureCCAGGTGTAG (2)
CTCGAGTCTC (3)
GATGTAAAAA
GCAGCTATCC (3)
GGGTAGCTGG
TAAAGTAAAT
TGAAATAATT (2)
TGTCTTAAAA
36.30.0363
P8 GC+SHH+1d cultureCTCGAGTCTC (3)
GATGTAAAAA
GCAGCTATCC (3)
GGGATTGCTT
GGGTAGCTGG
GTGGACTCTG (2)
GTTACATCAA
TAAAGTAAAT
TGAAATAATT (2)
610.061
3T3 fibroblastsCTCGAGTCTC (3)
GGGTAGCTGG
GTAACTTGTG (2)
196.20.1962
E15 cortexCTCGAGTCTC (3)
19.80.0198
P1 cortexAAAGGATGTT (2)
CTCGAGTCTC (3)
TGAAATAATT (2)
22.60.0226
HypothalamusAAAGGATGTT (2)
AAGATGCGCA (2)
CCAGGTGTAG (2)
CTCGAGTCTC (3)
GATGTAAAAA
GGGTAGCTGG
GTGGACTCTG (2)
TGAAATAATT (2)
19.80.0198
E12.5 retinaAAGATGCGCA (2)
ACAACATATT
CTCGAGTCTC (3)
GATGTAAAAA
GGGTAGCTGG
GTTACATCAA
TAAAGTAAAT
TAAGGTGGTT
65.90.0659
E14.5 retinaCACACCACAC
CTCGAGTCTC (3)
GGGTAGCTGG
GTTACATCAA
TAAAGTAAAT
TAAGGTGGTT
TGAAATAATT (2)
21.70.0217
E16.5 retinaAAGATGCGCA (2)
ACAACATATT
CTCGAGTCTC (3)
GCAGCTATCC (3)
GTAACTTGTG (2)
GTGGACTCTG (2)
TGAAATAATT (2)
27.10.0271
E18.5 retinaACAACATATT
CTCGAGTCTC (3)
GATGTAAAAA
GCAGCTATCC (3)
GTTACATCAA
TAAAGTAAAT
TGAAATAATT (2)
TGTCTTAAAA
27.30.0273
P0.5 retinaCTCGAGTCTC (3)
GGGTAGCTGG
TAAAGTAAAT
49.10.0491
P2.5 retinaAAAGGATGTT (2)
CACACCACAC
CTCGAGTCTC (3)
GATGTAAAAA
GCCAGCTTTA
GGGTAGCTGG
TAAAGTAAAT
TAAGGTGGTT
TGAAATAATT (2)
30.10.0301
P4.5 retinaAAGATGCGCA (2)
ACAACATATT
CCAGGTGTAG (2)
CTCGAGTCTC (3)
GATGTAAAAA
GTTACATCAA
TAAGGTGGTT
140.014
P6.5 retinaAAAGGATGTT (2)
CACACCACAC
CTCGAGTCTC (3)
GATGTAAAAA
GCAGCTATCC (3)
GGGATTGCTT
TAAGGTGGTT
TGAAATAATT (2)
31.70.0317
P10.5 crx- retinaCTCGAGTCTC (3)
GATGTAAAAA
GTAACTTGTG (2)
14.90.0149
P10.5 crx+ retinaCTCGAGTCTC (3)
GATGTAAAAA
GCAGCTATCC (3)
GCCAGCTTTA
GGGTAGCTGG
TAAAGTAAAT
TAAGGTGGTT
24.90.0249
Adult retinalCTCGAGTCTC (3)
GATGTAAAAA
GGGATTGCTT
GGGTAGCTGG
TGAAATAATT (2)
22.40.0224
ONLCTCGAGTCTC (3)
GATGTAAAAA
GCCAGCTTTA
GGGATTGCTT
GTTACATCAA
TAAAGTAAAT
TGAAATAATT (2)
24.70.0247