| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) AATAAAAATT ACAACATTAA (2) GTGGCTCAGG (4)
| 208.7 | 0.2087 |
| Cb medulloblastoma | AAAAAAAAAA (2) AATAAAAATT ATCTTGATTT ATGCTCATTA
| 811.6 | 0.8116 |
| P8 GC+1d culture | AAAAAAAAAA (2) ATGCTCATTA CAGGTAGCTG GTGGCTCAGG (4)
| 207.6 | 0.2076 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) ATGCTCATTA CAGGTAGCTG GTAGTATAAG GTGGCTCAGG (4) TCTTCTGTAT (2)
| 285.8 | 0.2858 |
| 3T3 fibroblasts | AAAAAAAAAA (2)
| 28 | 0.028 |
| E15 cortex | AAAAAAAAAA (2) GTGGCTCAGG (4)
| 217.7 | 0.2177 |
| P1 cortex | AAAAAAAAAA (2) ATCTTGATTT
| 249.9 | 0.2499 |
| Hypothalamus | AAAAAAAAAA (2) ATGCTCATTA
| 130.4 | 0.1304 |
| E12.5 retina | AAAAAAAAAA (2) ACAACATTAA (2) TTTCAGGTTG
| 144.6 | 0.1446 |
| E14.5 retina | AAAAAAAAAA (2) GTGGCTCAGG (4)
| 96.5 | 0.0965 |
| E16.5 retina | AAAAAAAAAA (2) ATGCTCATTA GTAGTATAAG TCTTCTGTAT (2)
| 48.9 | 0.0489 |
| E18.5 retina | AAAAAAAAAA (2) GTAGTATAAG TTTCAGGTTG
| 378.3 | 0.3783 |
| P0.5 retina | AAAAAAAAAA (2) TTTCAGGTTG
| 121.7 | 0.1217 |
| P2.5 retina | AAAAAAAAAA (2) ATGCTCATTA GTGGCTCAGG (4)
| 332.7 | 0.3327 |
| P4.5 retina | AAAAAAAAAA (2) AATAAAAATT GTGGCTCAGG (4)
| 287.3 | 0.2873 |
| P6.5 retina | AAAAAAAAAA (2)
| 266.8 | 0.2668 |
| P10.5 crx- retina | AAAAAAAAAA (2) AATAAAAATT ACAACATTAA (2) ATGCTCATTA
| 50.3 | 0.0503 |
| P10.5 crx+ retina | AAAAAAAAAA (2) ATGCTCATTA
| 98 | 0.098 |
| Adult retinal | AAAAAAAAAA (2) ATGCTCATTA CAGGTAGCTG
| 64.9 | 0.0649 |
| ONL | AAAAAAAAAA (2) ATCTTGATTT ATGCTCATTA GTGGCTCAGG (4) TCTTCTGTAT (2)
| 111 | 0.111 |