| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAGAA AAGTAAAGCG
| 50.5 | 0.0505 |
| Cb medulloblastoma | AAAAAAAGAA AAGTAAAGCG
| 25.4 | 0.0254 |
| P8 GC+1d culture | AAAAAAAGAA AAGTAAAGCG ATGAGAAGGA
| 68.4 | 0.0684 |
| P8 GC+SHH+1d culture | AAGTAAAGCG ATGAGAAGGA TTTGTTGGAT
| 57.4 | 0.0574 |
| 3T3 fibroblasts | AAGTAAAGCG
| 3.5 | 0.0035 |
| E15 cortex | AAGTAAAGCG
| 14.8 | 0.0148 |
| P1 cortex | AAGTAAAGCG
| 9.1 | 0.0091 |
| Hypothalamus | AAAAAAAGAA AAGTAAAGCG TTTGTTGGAT
| 48.9 | 0.0489 |
| E12.5 retina | AAAAAAAGAA AAGTAAAGCG
| 62 | 0.062 |
| E14.5 retina | AAGTAAAGCG ATGAGAAGGA GGATTCATTG TTTGTTGGAT
| 58.2 | 0.0582 |
| E16.5 retina | AAGTAAAGCG AGGTGATCTA
| 74.2 | 0.0742 |
| E18.5 retina | AAGTAAAGCG GATCAGGTAA TTTGTTGGAT
| 74.5 | 0.0745 |
| P0.5 retina | AAGTAAAGCG
| 35.3 | 0.0353 |
| P2.5 retina | AAAAAAAGAA AAGTAAAGCG AGGTGATCTA GGATTCATTG
| 40.5 | 0.0405 |
| P4.5 retina | AAGTAAAGCG
| 37.6 | 0.0376 |
| P6.5 retina | AAGTAAAGCG GATCAGGTAA
| 28.4 | 0.0284 |
| P10.5 crx- retina | AAGTAAAGCG GGATTCATTG TTTGTTGGAT
| 55.8 | 0.0558 |
| P10.5 crx+ retina | AAGTAAAGCG AGGTGATCTA
| 26.9 | 0.0269 |
| Adult retinal | AAAAAAAGAA AAGTAAAGCG GATCAGGTAA GGATTCATTG
| 18.6 | 0.0186 |
| ONL | AAAAAAAGAA AAGTAAAGCG
| 9.6 | 0.0096 |