Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.325584	Rps6	ribosomal protein S6	4		20104
Gene Ontology	cytoplasm | cytosolic ribosome (sensu Eukarya) | cytosolic small ribosomal subunit (sensu Eukarya) | intracellular | protein biosynthesis | ribosome | ribosome biogenesis | RNA binding | structural constituent of ribosome | structural constituent of ribosome
Human Homolog	RPS6[ribosomal protein S6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 79 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAACCTAACT CGCTTCTCAT GAAGAGTGAG GCAGAGTGCG GCCACGGAAG 24.4 0.0244 Cb medulloblastoma GAAGAGTGAG GCAGAGTGCG GGAAACCCTG 13.8 0.0138 P8 GC+1d culture AGAGCTTTAA CGCTTCTCAT GAAGAGTGAG GCAGAGTGCG GGAAACCCTG GTTGTTACCA GTTTCAGCAC 54.5 0.0545 P8 GC+SHH+1d culture AGAGCTTTAA CGCTTCTCAT GAAGAGTGAG GCAGAGTGCG 59.7 0.0597 3T3 fibroblasts GCAGAGTGCG GCCAGAGTGC (3) 171.7 0.1717 E15 cortex AAGCAAGGTG GCAGAGTGCG GCCAGAGTGC (3) 118.7 0.1187 P1 cortex AGAGCTTTAA GCAGAGTGCG 45.4 0.0454 Hypothalamus AAGCAAGGTG CGCTTCTCAT GCAGAGTGCG GTTTCAGCAC 32.5 0.0325 E12.5 retina CGCTTCTCAT GCAGAGTGCG GTTTCAGCAC 41.3 0.0413 E14.5 retina AAGCAAGGTG CGCTTCTCAT GCAGAGTGCG 18.2 0.0182 E16.5 retina AAGCAAGGTG ATTACGCCAA CGCTTCTCAT GCAGAGTGCG GCCACGGAAG GCCAGAGTGC (3) 30.7 0.0307 E18.5 retina AAGCAAGGTG AGAGCTTTAA CGCTTCTCAT GCAGAGTGCG GGAAACCCTG 25.4 0.0254 P0.5 retina ATTACGCCAA CGCTTCTCAT GCAGAGTGCG 64.8 0.0648 P2.5 retina AGAGCTTTAA CGCTTCTCAT GCAGAGTGCG 14.1 0.0141 P4.5 retina GCAGAGTGCG 17.8 0.0178 P6.5 retina AAACCTAACT AGAGCTTTAA GCAGAGTGCG GCCAGAGTGC (3) GGAAACCCTG 21.7 0.0217 P10.5 crx- retina GCAGAGTGCG GCCACGGAAG GGAAACCCTG 37.2 0.0372 P10.5 crx+ retina GAAGAGTGAG GCAGAGTGCG GCCACGGAAG GGAAACCCTG GTTTCAGCAC 36.4 0.0364 Adult retinal AAGCAAGGTG ATTACGCCAA CGCTTCTCAT GCAGAGTGCG GCCAGAGTGC (3) GGAAACCCTG GTTTCAGCAC 53.9 0.0539 ONL AAACCTAACT GCAGAGTGCG GGAAACCCTG GTTGTTACCA GTTTCAGCAC 28.7 0.0287