| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CACACATAAA (2) CCGAATTACC
| 8.1 | 0.0081 |
| Cb medulloblastoma | CCGAATTACC CCGAGTTACC
| 4.6 | 0.0046 |
| P8 GC+1d culture | CCGAATTACC CCGAGTTACC GGTTTTTATT (2) TTTGTATCAC
| 11.3 | 0.0113 |
| P8 GC+SHH+1d culture | CACACATAAA (2) CCGAGTTACC GCCGGGGAGG (2) GGTTTTTATT (2) GTTTCTCTGT
| 9.4 | 0.0094 |
| 3T3 fibroblasts | CCGAGTTACC GTTTCTCTGT TTCCTCACGA
| 28 | 0.028 |
| Hypothalamus | CCGAATTACC TTTGTATCAC
| 5.4 | 0.0054 |
| E12.5 retina | CACACATAAA (2) CCGAATTACC GCCGGGGAGG (2) GTTTCTCTGT
| 13.2 | 0.0132 |
| E14.5 retina | GGTTTTTATT (2) GTTTCTCTGT TTCCTCACGA
| 5.4 | 0.0054 |
| E16.5 retina | GTTTCTCTGT
| 3.6 | 0.0036 |
| E18.5 retina | CACACATAAA (2) CCGAATTACC GGTTTTTATT (2) GTTTCTCTGT TTCCTCACGA
| 19.9 | 0.0199 |
| P0.5 retina | CACACATAAA (2) CCGAATTACC GTTTCTCTGT
| 11.9 | 0.0119 |
| P2.5 retina | CACACATAAA (2) CCGAATTACC GCCGGGGAGG (2) GGTTTTTATT (2) GTTTCTCTGT
| 16 | 0.016 |
| P4.5 retina | CACACATAAA (2) CCGAATTACC GTTTCTCTGT
| 6 | 0.006 |
| P6.5 retina | CCGAATTACC GGTTTTTATT (2) TTCCTCACGA
| 6.7 | 0.0067 |
| P10.5 crx- retina | CACACATAAA (2) CCGAATTACC CCGAGTTACC
| 14.9 | 0.0149 |
| P10.5 crx+ retina | CCGAGTTACC GTTTCTCTGT
| 3.8 | 0.0038 |
| Adult retinal | CCGAATTACC GCCGGGGAGG (2) GGTTTTTATT (2) GTTTCTCTGT
| 13.1 | 0.0131 |
| ONL | CACACATAAA (2) CCGAATTACC GTTTCTCTGT
| 9.5 | 0.0095 |