| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AGCAATGAAA GCCTCCAACT (2) TCAAACACAA (4) TCCTTCCCTT (3)
| 9.8 | 0.0098 |
| Cb medulloblastoma | AGCAATGAAA CAGAAAAGCT (4) GCACCAACAG TCCTTCCCTT (3)
| 9.2 | 0.0092 |
| P8 GC+1d culture | AGCAATGAAA CAGAAAAGCT (4) TCCTTCCCTT (3)
| 5.6 | 0.0056 |
| P8 GC+SHH+1d culture | GCCTCCAACT (2)
| 4.7 | 0.0047 |
| 3T3 fibroblasts | GCCTCCAACT (2)
| 3.5 | 0.0035 |
| E15 cortex | GGGGTCTGCC
| 24.7 | 0.0247 |
| Hypothalamus | AGCAATGAAA CAGAAAAGCT (4) GCACCAACAG GCCTCCAACT (2) GGGGTCTGCC GTATATGAAT TCCTTCCCTT (3)
| 16.2 | 0.0162 |
| E12.5 retina | AGCAATGAAA
| 3.8 | 0.0038 |
| E14.5 retina | TCCTTCCCTT (3)
| 7.3 | 0.0073 |
| E16.5 retina | AGCAATGAAA GCCTCCAACT (2) TCCTTCCCTT (3)
| 5.4 | 0.0054 |
| E18.5 retina | TCCTTCCCTT (3)
| 1.8 | 0.0018 |
| P0.5 retina | GCCTCCAACT (2) GTATATGAAT
| 4 | 0.004 |
| P2.5 retina | AGCAATGAAA GCCTCCAACT (2) GTATATGAAT TCAAACACAA (4) TCCTTCCCTT (3)
| 10.7 | 0.0107 |
| P4.5 retina | AGCAATGAAA GCACCAACAG
| 4 | 0.004 |
| P6.5 retina | AGCAATGAAA GGGGTCTGCC GTATATGAAT
| 10.1 | 0.0101 |
| P10.5 crx- retina | AGCAATGAAA GCCTCCAACT (2) TCAAACACAA (4)
| 11.2 | 0.0112 |
| P10.5 crx+ retina | AGCAATGAAA GCACCAACAG GCCTCCAACT (2) GGGGTCTGCC GTATATGAAT
| 21.1 | 0.0211 |
| Adult retinal | AGCAATGAAA CAGAAAAGCT (4) GTATATGAAT
| 7.5 | 0.0075 |
| ONL | AGCAATGAAA CAGAAAAGCT (4) GCCTCCAACT (2)
| 13.4 | 0.0134 |