Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.327442	Ldb1	LIM domain binding 1	19	19 C3 (19 46.0 cM)	16825
Gene Ontology	anterior/posterior axis specification | development | gastrulation (sensu Mammalia) | nucleus | transcription cofactor activity | Wnt receptor signaling pathway
Human Homolog	LDB1[LIM domain binding 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 26 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 66 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGCTGCTGAA (2) TGGATGCCTG TTTCCAGGTG 71.7 0.0717 Cb medulloblastoma CTGACCATCA (2) GCTGACCAGC GGGGAAGGGG TGGATGCCTG TTTCCAGGTG 117.9 0.1179 P8 GC+1d culture GGGGAAGGGG TACCCACCTA (2) TGGATGCCTG TTTCCAGGTG 105 0.105 P8 GC+SHH+1d culture AGCTCGGGGG TGGATGCCTG TTTCCAGGTG 72.6 0.0726 3T3 fibroblasts GGGGAAGGGG TGGATGCCTG TTTCCAGGTG 24.5 0.0245 E15 cortex AGCTCGGGGG AGCTGCTGAA (2) TGGATGCCTG TTTCCAGGTG 74.1 0.0741 P1 cortex TGGATGCCTG TTTCCAGGTG 59.1 0.0591 Hypothalamus CAGCCAGGAC GCTGACCAGC TGGATGCTGT TTTCCAGGTG 132.2 0.1322 E12.5 retina TACCCACCTA (2) TGGATGCCTG TTTCCAGGTG 78.9 0.0789 E14.5 retina AGTACCCCCT CAGCCAGGAC CTGACCATCA (2) TGGATGCTGT TTTCCAGGTG 83.7 0.0837 E16.5 retina CTGACCATCA (2) TGGATGCCTG TTTCCAGGTG 123.1 0.1231 E18.5 retina TGGATGCCTG TTTCCAGGTG 127.4 0.1274 P0.5 retina AGTACCCCCT TGGATGCCTG TTTCCAGGTG 98.2 0.0982 P2.5 retina AGCTCGGGGG CAGCCAGGAC GGGGAAGGGG TACCCACCTA (2) TGGATGCCTG TTTCCAGGTG 126.8 0.1268 P4.5 retina GGGGAAGGGG TGGATGCCTG TTTCCAGGTG 111 0.111 P6.5 retina TGGATGCCTG TTTCCAGGTG 93.4 0.0934 P10.5 crx- retina AGCTCGGGGG AGTACCCCCT TGGATGCCTG TTTCCAGGTG 63.3 0.0633 P10.5 crx+ retina TGGATGCCTG TTTCCAGGTG 76.9 0.0769 Adult retinal AGCTGCTGAA (2) TGGATGCCTG TTTCCAGGTG 38.9 0.0389 ONL GGGGAAGGGG TTTCCAGGTG 47.9 0.0479