| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AATAAAGGTA GCTGCCCTAA (2) GCTGCCGTAG GTAAAAAAAA (2)
| 62 | 0.062 |
| Cb medulloblastoma | CTCCTCTCCC GTAAAAAAAA (2) GTGATGCGGA
| 138.7 | 0.1387 |
| P8 GC+1d culture | AAACTGTACC AATAAAGGTA GCTGCCCTAA (2) GTAAAAAAAA (2)
| 79.9 | 0.0799 |
| P8 GC+SHH+1d culture | AATAAAGGTA CTCCTCTCCC GTAAAAAAAA (2) GTGATGCGGA
| 137 | 0.137 |
| 3T3 fibroblasts | CTCCTCTCCC CTCTGGGTTT GTAAAAAAAA (2)
| 17.5 | 0.0175 |
| E15 cortex | GCTGCCCTAA (2) GCTGCCGTAG GTAAAAAAAA (2) GTGATGCGGA
| 93.9 | 0.0939 |
| P1 cortex | GCTGCCCTAA (2) GCTGCCGTAG GTAAAAAAAA (2) GTGATGCGGA
| 68.2 | 0.0682 |
| Hypothalamus | AAACTGTACC CTCCTCTCCC GTAAAAAAAA (2) GTGATGCGGA
| 115.9 | 0.1159 |
| E12.5 retina | AATAAAGGTA GCTGCCCTAA (2) GTAAAAAAAA (2) GTGATGCGGA
| 56.4 | 0.0564 |
| E14.5 retina | AATAAAGGTA CTCTGGGTTT GTAAAAAAAA (2)
| 85.6 | 0.0856 |
| E16.5 retina | CTCCTCTCCC GCTGCCCTAA (2) GTAAAAAAAA (2)
| 72.4 | 0.0724 |
| E18.5 retina | AATAAAGGTA GCTGCCCTAA (2) GCTGCCGTAG GTAAAAAAAA (2) GTGATGCGGA
| 198.2 | 0.1982 |
| P0.5 retina | GCTGCCCTAA (2) GTAAAAAAAA (2) GTGATGCGGA
| 60.9 | 0.0609 |
| P2.5 retina | GCTGCCCTAA (2) GTAAAAAAAA (2) GTGATGCGGA
| 112.6 | 0.1126 |
| P4.5 retina | CTCCTCTCCC GCTGCCCTAA (2) GTAAAAAAAA (2) GTGATGCGGA
| 154.6 | 0.1546 |
| P6.5 retina | AATAAAGGTA GCTGCCCTAA (2) GTAAAAAAAA (2)
| 71.7 | 0.0717 |
| P10.5 crx- retina | GCTGCCCTAA (2) GTAAAAAAAA (2) GTGATGCGGA
| 39 | 0.039 |
| P10.5 crx+ retina | GCTGCCCTAA (2) GTAAAAAAAA (2) GTGATGCGGA
| 71.2 | 0.0712 |
| Adult retinal | AAACTGTACC CTCTGGGTTT GTAAAAAAAA (2)
| 27.8 | 0.0278 |
| ONL | GTAAAAAAAA (2) GTGATGCGGA
| 28.7 | 0.0287 |