Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.329022	Abcf1	ATP-binding cassette, sub-family F (GCN20), member 1	17	17 20.5 cM	224742
Gene Ontology	ATP binding | integral to plasma membrane | transport
Human Homolog	ABCF1[ATP-binding cassette, sub-family F (GCN20), member 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGCGACTTA GTAGAAAATG (2) 8.1 0.0081 Cb medulloblastoma GAGGAGACGC (2) GCTGCTGCCA (2) 6.9 0.0069 P8 GC+1d culture AAAGGTTGCC AAGGTGGCGT GAGCGACTTA GAGGAGACGC (2) GTAGAAAATG (2) 10.1 0.0101 P8 GC+SHH+1d culture AAGGTGGCGT AGCCCAGGAG GAGGAGACGC (2) 3.6 0.0036 3T3 fibroblasts AGCCCAGGAG GAGGAGACGC (2) GCTGCTGCCA (2) 42 0.042 E15 cortex AAGGTGGCGT GAGCGACTTA GAGGAGACGC (2) 14.7 0.0147 P1 cortex AAGGTGGCGT AGCCCAGGAG GAGCGACTTA 22.6 0.0226 Hypothalamus AAGGTGGCGT AGCCCAGGAG GAGGAGACGC (2) GCTGCTGCCA (2) 7.2 0.0072 E12.5 retina AAGGTGGCGT GCTGCTGCCA (2) 7.5 0.0075 E14.5 retina AAGGTGGCGT GCTGCTGCCA (2) 3.6 0.0036 E16.5 retina AAGGTGGCGT GCTGCTGCCA (2) 5.4 0.0054 E18.5 retina AAAGGTTGCC GCTGCTGCCA (2) 5.4 0.0054 P0.5 retina AAGGTGGCGT AGCCCAGGAG GAGGAGACGC (2) 11.8 0.0118 P2.5 retina GCTGCTGCCA (2) 3.5 0.0035 P4.5 retina AAAGGTTGCC AAGGTGGCGT 4 0.004 P6.5 retina AAGGTGGCGT GTAGAAAATG (2) 5 0.005 P10.5 crx- retina AGCCCAGGAG 1.9 0.0019 P10.5 crx+ retina AAAGGTTGCC GAGGAGACGC (2) GCTGCTGCCA (2) 5.7 0.0057 Adult retinal AGCCCAGGAG GCTGCTGCCA (2) GTAGAAAATG (2) 5.7 0.0057