Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.329234	Six3	sine oculis-related homeobox 3 homolog (Drosophila)	17	17 45.5 cM	20473
Gene Ontology	brain development | development | DNA binding | eye morphogenesis | eye morphogenesis (sensu Mammalia) | negative regulation of transcription | negative regulation of Wnt receptor signaling pathway | nucleus | protein binding | regulation of transcription, DNA-dependent | RNA polymerase II transcription factor activity, enhancer binding | transcription factor activity | transcriptional repressor activity
Human Homolog	SIX3[sine oculis homeobox homolog 3 (Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 22 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  Hypothalamus ACGATTTATT TGGCTCGAGG 5.4 0.0054 E12.5 retina ACGATTTATT TGGCTCGAGG 9.4 0.0094 E14.5 retina ACGATTTATT TGGCTCGAGG 20 0.02 E16.5 retina ACGATTTATT TGGCTCGAGG 30.8 0.0308 E18.5 retina ACGATTTATT TGGCTCGAGG 16.4 0.0164 P0.5 retina ACGATTTATT TGGCTCGAGG 15.7 0.0157 P2.5 retina ACGATTTATT TGGCTCGAGG 15.8 0.0158 P4.5 retina ACGATTTATT TGGCTCGAGG 13.9 0.0139 P6.5 retina ACGATTTATT 6.7 0.0067 P10.5 crx- retina ACGATTTATT 3.7 0.0037 P10.5 crx+ retina ACGATTTATT 3.8 0.0038 Adult retinal ACGATTTATT TGGCTCGAGG 5.6 0.0056 ONL ACGATTTATT 1.9 0.0019