Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.329560	1700017H01Rik	RIKEN cDNA 1700017H01 gene	18		74231
Mm.329560	Nfatc1	nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	18	18 E4 (18 54.0 cM)	18018
Gene Ontology	calcium ion transport | cytoplasm | DNA binding | G1/S transition of mitotic cell cycle | nucleus | regulation of transcription, DNA-dependent | transcription factor activity
Human Homolog	NFATC1[nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 9 In Situ Hybridization Images

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SAGE Tags

Total 36 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAGCAAAAA (4) GGAGCAGAGG (2) 6.6 0.0066 Cb medulloblastoma AAAGCAAAAA (4) 4.6 0.0046 P8 GC+1d culture AAAGCAAAAA (4) GGAGCAGAGG (2) TGTTGTTGTT (2) 15.9 0.0159 P8 GC+SHH+1d culture GGAGCAGAGG (2) TGTTGTTGTT (2) 7 0.007 3T3 fibroblasts AAAGCAGCCA (3) GGAGCAGAGG (2) 17.5 0.0175 E15 cortex AAAGCAGCCA (3) GGAGCAGAGG (2) 9.8 0.0098 P1 cortex TGTTGTTGTT (2) 4.5 0.0045 Hypothalamus GGAGCAGAGG (2) 3.6 0.0036 E12.5 retina AAAGCAAAAA (4) GGAGCAGAGG (2) 5.7 0.0057 E14.5 retina AAAGCAAAAA (4) GGAGCAGAGG (2) 9.1 0.0091 E16.5 retina AAAGCAAAAA (4) GGAGCAGAGG (2) 9 0.009 E18.5 retina AAAGCAAAAA (4) 3.6 0.0036 P0.5 retina GGAGCAGAGG (2) 9.8 0.0098 P2.5 retina GGAGCAGAGG (2) 3.5 0.0035 P4.5 retina AAAGCAAAAA (4) GGAGCAGAGG (2) 19.9 0.0199 P6.5 retina AAAGCAAAAA (4) GGAGCAGAGG (2) 11.6 0.0116 P10.5 crx- retina AAAGCAAAAA (4) GGAGCAGAGG (2) 3.8 0.0038 P10.5 crx+ retina AAAGCAAAAA (4) GGAGCAGAGG (2) 17.3 0.0173 Adult retinal AAAGCAAAAA (4) GGAGCAGAGG (2) 24.1 0.0241 ONL AAAGCAAAAA (4) AAAGCAGCCA (3) GGAGCAGAGG (2) 24.9 0.0249