Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.330538	Slc24a5	solute carrier family 24, member 5	2		317750
Mm.330538	Myef2	myelin basic protein expression factor 2, repressor	2	2 73.0 cM	17876
Human Homolog	MYEF2[myelin expression factor 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 79 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAATAAAA (3) GTTGGAACCT (3) TCTTCATTTA (3) TTGTTAAAAT (3) 24.5 0.0245 Cb medulloblastoma AAAAATAAAA (3) GAGACCAAGG (3) TTGTTAAAAT (3) 25.4 0.0254 P8 GC+1d culture AAAAATAAAA (3) AATTTTCTTC (3) GAGACCAAGG (3) GTTGGAACCT (3) TCTTCATTTA (3) TGTGTGTGTC TTGTTAAAAT (3) 27.3 0.0273 P8 GC+SHH+1d culture AAAAATAAAA (3) AATTTTCTTC (3) GTTGGAACCT (3) TCTTCATTTA (3) TTGTTAAAAT (3) 16.5 0.0165 3T3 fibroblasts GTTGGAACCT (3) TCTTCATTTA (3) 7 0.007 E15 cortex AATTTTCTTC (3) 4.9 0.0049 P1 cortex AAAAATAAAA (3) TCTTCATTTA (3) TGTGTGTGTC 36.3 0.0363 Hypothalamus AAAAATAAAA (3) AATGAGCTTG (2) AATTTTCTTC (3) 18.1 0.0181 E12.5 retina AAAAATAAAA (3) GAGACCAAGG (3) GTTGGAACCT (3) TCTTCATTTA (3) TTGTTAAAAT (3) 13.3 0.0133 E14.5 retina AAAAATAAAA (3) GTTGGAACCT (3) TCTTCATTTA (3) TTGTTAAAAT (3) 25.4 0.0254 E16.5 retina AAAAATAAAA (3) TTGTTAAAAT (3) 12.7 0.0127 E18.5 retina AAAAATAAAA (3) AATGAGCTTG (2) GTTGGAACCT (3) TTGTTAAAAT (3) 16.4 0.0164 P0.5 retina AAAAATAAAA (3) GAGACCAAGG (3) GTTGGAACCT (3) TCTTCATTTA (3) TGTGTGTGTC TTGTTAAAAT (3) 19.7 0.0197 P2.5 retina AAAAATAAAA (3) AATGAGCTTG (2) TCTTCATTTA (3) TTGTTAAAAT (3) 14.2 0.0142 P4.5 retina AAAAATAAAA (3) GTTGGAACCT (3) TCTTCATTTA (3) TGTGTGTGTC TTGTTAAAAT (3) 23.7 0.0237 P6.5 retina AAAAATAAAA (3) AATGAGCTTG (2) GCTATATCTA (2) GTTGGAACCT (3) 20 0.02 P10.5 crx- retina AAAAATAAAA (3) AATGAGCTTG (2) GCTATATCTA (2) TTGTTAAAAT (3) 9.4 0.0094 P10.5 crx+ retina AAAAATAAAA (3) GTTGGAACCT (3) TCTTCATTTA (3) TGTGTGTGTC 11.4 0.0114 Adult retinal AAAAATAAAA (3) GAGACCAAGG (3) GTTGGAACCT (3) TTGTTAAAAT (3) 9.4 0.0094 ONL AATTTTCTTC (3) GAGACCAAGG (3) GTTGGAACCT (3) TCTTCATTTA (3) TTGTTAAAAT (3) 9.5 0.0095