| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) ACTAGCTTGG (3) ATGAGAATTT ATGTTTCTTC (3) CACAGCTGCT (3) GCTTTGTTTT (2) TAAAAAAAAA (3)
| 303.3 | 0.3033 |
| Cb medulloblastoma | AAAAAAAAAA (2) ATGTTTCTTC (3) GCTTTGTTTT (2) TAAAAAAAAA (3)
| 922.7 | 0.9227 |
| P8 GC+1d culture | AAAAAAAAAA (2) ACTAGCTTGG (3) ATGTTTCTTC (3) CACAGCTGCT (3) GCCACAGAAG (2) GCTTTGTTTT (2) TAAAAAAAAA (3)
| 306.9 | 0.3069 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) ATGAGAATTT ATGTTTCTTC (3) CACAGCTGCT (3) GCCACAGAAG (2) GCTTTGTTTT (2) GGCAGACTGA TAAAAAAAAA (3)
| 427.5 | 0.4275 |
| 3T3 fibroblasts | AAAAAAAAAA (2) GCTTTGTTTT (2) TAAAAAAAAA (3)
| 42 | 0.042 |
| E15 cortex | AAAAAAAAAA (2) GCTTTGTTTT (2) TAAAAAAAAA (3)
| 227.6 | 0.2276 |
| P1 cortex | AAAAAAAAAA (2) ACTAGCTTGG (3) ATGAGAATTT GACAGAGAAG (2) GCTTTGTTTT (2) TAAAAAAAAA (3)
| 322.6 | 0.3226 |
| Hypothalamus | AAAAAAAAAA (2) ATGTTTCTTC (3) CACAGCTGCT (3) GCCACAGAAG (2) GCTTTGTTTT (2) GGCAGACTGA TAAAAAAAAA (3)
| 168.4 | 0.1684 |
| E12.5 retina | AAAAAAAAAA (2) ATGTTTCTTC (3) CACAGCTGCT (3) GCTTTGTTTT (2) TAAAAAAAAA (3)
| 191.5 | 0.1915 |
| E14.5 retina | AAAAAAAAAA (2) ACTAGCTTGG (3) ATGAGAATTT GCTTTGTTTT (2) TAAAAAAAAA (3)
| 149.3 | 0.1493 |
| E16.5 retina | AAAAAAAAAA (2) ATGAGAATTT CACAGCTGCT (3) GCTTTGTTTT (2) TAAAAAAAAA (3)
| 94.1 | 0.0941 |
| E18.5 retina | AAAAAAAAAA (2) CACAGCTGCT (3) GACAGAGAAG (2) GCTTTGTTTT (2) TAAAAAAAAA (3)
| 502 | 0.502 |
| P0.5 retina | AAAAAAAAAA (2) ACTAGCTTGG (3) GCTTTGTTTT (2) TAAAAAAAAA (3)
| 168.8 | 0.1688 |
| P2.5 retina | AAAAAAAAAA (2) GCTTTGTTTT (2) TAAAAAAAAA (3)
| 418.9 | 0.4189 |
| P4.5 retina | AAAAAAAAAA (2) GCTTTGTTTT (2) GGCAGACTGA TAAAAAAAAA (3)
| 418 | 0.418 |
| P6.5 retina | AAAAAAAAAA (2) ACTAGCTTGG (3) ATGAGAATTT GACAGAGAAG (2) GCTTTGTTTT (2) GGCAGACTGA TAAAAAAAAA (3)
| 353.5 | 0.3535 |
| P10.5 crx- retina | AAAAAAAAAA (2) ACTAGCTTGG (3) ATGAGAATTT GCTTTGTTTT (2) TAAAAAAAAA (3)
| 67 | 0.067 |
| P10.5 crx+ retina | AAAAAAAAAA (2) ACTAGCTTGG (3) ATGAGAATTT GCTTTGTTTT (2) TAAAAAAAAA (3)
| 142.3 | 0.1423 |
| Adult retinal | AAAAAAAAAA (2) ATGAGAATTT GCTTTGTTTT (2) TAAAAAAAAA (3)
| 83.3 | 0.0833 |
| ONL | AAAAAAAAAA (2) ATGAGAATTT GCTTTGTTTT (2) TAAAAAAAAA (3)
| 149.3 | 0.1493 |