| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ACTCTAAAAA (3) TGTATTTATA (2)
| 8.1 | 0.0081 |
| Cb medulloblastoma | ACTCTAAAAA (3)
| 13.9 | 0.0139 |
| P8 GC+1d culture | ACTCTAAAAA (3) TGGGTCCTGG (2) TGTATTTATA (2)
| 17.1 | 0.0171 |
| P8 GC+SHH+1d culture | ACTCTAAAAA (3) TGTATTTATA (2)
| 9.4 | 0.0094 |
| E15 cortex | TGGGTCCTGG (2)
| 9.9 | 0.0099 |
| P1 cortex | TGTATTTATA (2)
| 4.5 | 0.0045 |
| Hypothalamus | ACTCTAAAAA (3) TGTATTTATA (2)
| 9 | 0.009 |
| E12.5 retina | ACTCTAAAAA (3) TGTATTTATA (2)
| 15 | 0.015 |
| E14.5 retina | ACTCTAAAAA (3) TGTATTTATA (2)
| 14.6 | 0.0146 |
| E16.5 retina | TGGGTCCTGG (2) TGTATTTATA (2)
| 19.9 | 0.0199 |
| E18.5 retina | ACTCTAAAAA (3) TGTATTTATA (2)
| 29.1 | 0.0291 |
| P0.5 retina | ACTCTAAAAA (3) TGTATTTATA (2)
| 4 | 0.004 |
| P2.5 retina | ACTCTAAAAA (3) TGTATTTATA (2)
| 17.6 | 0.0176 |
| P4.5 retina | ACTCTAAAAA (3) TGGGTCCTGG (2) TGTATTTATA (2)
| 17.9 | 0.0179 |
| P6.5 retina | ACTCTAAAAA (3) TGTATTTATA (2)
| 10 | 0.01 |
| P10.5 crx- retina | ACTCTAAAAA (3) TGTATTTATA (2)
| 9.3 | 0.0093 |
| P10.5 crx+ retina | ACTCTAAAAA (3) TGGGTCCTGG (2) TGTATTTATA (2)
| 9.5 | 0.0095 |
| Adult retinal | ACTCTAAAAA (3)
| 3.7 | 0.0037 |
| ONL | TGGGTCCTGG (2) TGTATTTATA (2)
| 15.3 | 0.0153 |