Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.331	Ubc	ubiquitin C	5	5 64.0 cM	22190
Mm.331	AV046995	expressed sequence AV046995	15		105994
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 247 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACACCATAGA (2) ACGAACCTGG AGGGTGGCGG (2) ATGCTGGGCT CAACAAAACC (2) CAGAACTTTG CAGATCTTCG CAGATCTTTG (2) CCACCTCTCA CCTGCAAGGA GAGGGCATCC GCCGGCAGCC (2) GGCACAAGGT (2) GGGAAGTCTG TCAGATCTTT (2) 133.8 0.1338 Cb medulloblastoma ACACCATAGA (2) ACGAACCTGG AGGGTGGCGG (2) CAACAAAACC (2) CAGAACTTTG CAGATCTTTG (2) CCACCTCTGA (2) CCTGCAAGGA GAGGGCATCC GGGAAGTCTG GGGGGGGGGG TTATCCTTTT 92.3 0.0923 P8 GC+1d culture AAATAAACCT AACATCAAGC (2) AGGGTGGCGG (2) CACAGGCCTG (5) CAGAACTTTG CAGATCTTCG CAGATCTTTG (2) CATTCCAAAG (2) CCACCTCTCA CCACCTCTGA (2) CCAGCTCTAA (2) CCTGCAAGGA GAGGGCATCC GGGAAGTCTG GGGGGGGGGG GTTTGAGAAC TCAGATCTTT (2) 124.1 0.1241 P8 GC+SHH+1d culture AAGATCTTTG ACAAGAGATT AGGGTGGCGG (2) CAACAAAACC (2) CACAGGCCTG (5) CAGAACTTTG CAGATCTTCG CAGATCTTTG (2) CAGATTTTTC (2) CCACCTCTCA CCAGCTCTAA (2) CCTGCAAGGA GAGGGCATCC GCCAGGACCC GCCGGCAGCC (2) GGGAAGTCTG GGGGGGGGGG GTCTCTTGGG GTTTGAGAAC TCAGATCTTT (2) 125.4 0.1254 3T3 fibroblasts AGGGTGGCGG (2) CAGATCTTTG (2) CCACCTCTCA CCACCTCTGA (2) CCTGCAAGGA GAGGGCATCC GGGAAGTCTG GGGGGGGGGG 129.6 0.1296 E15 cortex ACGAACCTGG CAGAACTTTG CAGATCTTCG CAGATCTTTG (2) CCTGCAAGGA GAGGGCATCC GGGAAGTCTG GGGGGGGGGG TGACCTCGGG (2) 78.8 0.0788 P1 cortex AAACACAGGA (3) CAACAAAACC (2) CAGATCTTCG CAGATCTTTG (2) GAGGGCATCC GGGAAGTCTG GTCTCTTGGG 81.7 0.0817 Hypothalamus AGGGTGGCGG (2) CAACAAAACC (2) CAGATCTTCG CAGATCTTTG (2) CCACCTCTCA CCACCTCTGA (2) CCTGCAAGGA GAGGGCATCC GCCGGCAGCC (2) GGGAAGTCTG GGGGGGGGGG TGACCTCGGG (2) 112.3 0.1123 E12.5 retina CAACAAAACC (2) CACAGGCCTG (5) CAGATCTTCG CAGATCTTTG (2) CCTGCAAGGA GAGGGCATCC TGACCTCGGG (2) 60.3 0.0603 E14.5 retina AGGGTGGCGG (2) CAACAAAACC (2) CAGAACTTTG CAGATCTTCG CAGATCTTTG (2) CCACCTCTCA CCTGCAAGGA GAGGGCATCC GCCAGGACCC GCCGGCAGCC (2) GGGAAGTCTG GTTTGAGAAC TCAGATCTTT (2) TGACCTCGGG (2) TTATCCTTTT 103.6 0.1036 E16.5 retina AAACACAGGA (3) AAATAAACCT ACGAACCTGG AGGGTGGCGG (2) CAACAAAACC (2) CACAGGCCTG (5) CAGATCTTCG CAGATCTTTG (2) CCACCTCTCA CCACCTCTGA (2) CCTGCAAGGA GAGGGCATCC GCCAGGACCC GTCTCTTGGG 144.8 0.1448 E18.5 retina AAATAAACCT AACATCAAGC (2) AGGGTGGCGG (2) CAACAAAACC (2) CAGATCTTCG CAGATCTTTG (2) CCACCTCTCA CCTGCAAGGA GAGGGCATCC GGGAAGTCTG TGACCTCGGG (2) 61.7 0.0617 P0.5 retina AGGGTGGCGG (2) CAACAAAACC (2) CACAGGCCTG (5) CAGATCTTCG CAGATCTTTG (2) CCACCTCTCA CCAGGAATTT CCTGCAAGGA GAGGGCATCC GGCACAAGGT (2) GGGAAGTCTG GTTTGAGAAC 108.1 0.1081 P2.5 retina ACGAACCTGG AGGGTGGCGG (2) CAACAAAACC (2) CAGAACTTTG CAGATCTTCG CAGATCTTTG (2) CCACCTCTCA CCTGCAAGGA GAGGGCATCC GGCACAAGGT (2) GGGAAGTCTG GGGGGGGGGG 82.7 0.0827 P4.5 retina AACATCAAGC (2) AGGGTGGCGG (2) CAACAAAACC (2) CAGATCTTCG CAGATCTTTG (2) CATTCCAAAG (2) CCTGCAAGGA GAGGGCATCC GCCAGGACCC GGGGGGGGGG 83.3 0.0833 P6.5 retina AAACACAGGA (3) ACAAGAGATT CAACAAAACC (2) CAGATCTTCG CAGATCTTTG (2) CCACCTCTCA CCAGGAATTT CCTGCAAGGA GAGGGCATCC GCCAGGACCC GGCACAAGGT (2) GGGAAGTCTG GGGGGGGGGG TTATCCTTTT 76.9 0.0769 P10.5 crx- retina AACATCAAGC (2) ACGAACCTGG AGGGTGGCGG (2) ATGCTGGGCT CAACAAAACC (2) CACAGGCCTG (5) CAGATCTTCG CAGATCTTTG (2) CCACCTCTCA CCACCTCTGA (2) CCAGGAATTT CCTGCAAGGA GAGGGCATCC GGGAAGTCTG GTTTGAGAAC TTATCCTTTT 198.9 0.1989 P10.5 crx+ retina ACGAACCTGG AGGGTGGCGG (2) CAACAAAACC (2) CAGATCTTCG CAGATCTTTG (2) CCACCTCTCA CCTGCAAGGA GAGGGCATCC GGCACAAGGT (2) GGGAAGTCTG GGGGGGGGGG TGACCTCGGG (2) 105.7 0.1057 Adult retinal AAGATCTTTG CAACAAAACC (2) CACAGGCCTG (5) CAGATCTTCG CAGATCTTTG (2) CAGATTTTTC (2) CCACCTCTCA CCAGCTCTAA (2) CCTGCAAGGA GAGGGCATCC GGCACAAGGT (2) GGGAAGTCTG GGGGGGGGGG TGACCTCGGG (2) 92.9 0.0929 ONL AAGATCTTTG ACAAGAGATT ACACCATAGA (2) CAGATCTTTG (2) CAGATTTTTC (2) CCACCTCTCA GAGGGCATCC GGCACAAGGT (2) GGGAAGTCTG GGGGGGGGGG 42 0.042