Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.331784	Utrn	utrophin	10	10 3.0 cM	22288
Gene Ontology	actin binding | adult somatic muscle development | calcium ion binding | cell junction | chemotaxis | cytoskeleton | membrane | membrane fraction | muscle contraction | muscle development | plasma membrane | protein binding | signal transduction | structural molecule activity | synapse | transmembrane receptor activity
Human Homolog	UTRN[utrophin (homologous to dystrophin)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 51 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGGAGGTGG (2) TGAGAGACCA (2) 11.4 0.0114 Cb medulloblastoma TCAGACCTGC (3) TGAGAGACCA (2) TTTTCTATGT (2) 6.9 0.0069 P8 GC+1d culture AAGGAGGTGG (2) ACTCCTCAAA (2) GGAAAAGTGG TGAGAGACCA (2) TTTTCTATGT (2) 7.9 0.0079 P8 GC+SHH+1d culture GGAAAAGTGG TGAGAGACCA (2) TTTTCTATGT (2) 59.8 0.0598 3T3 fibroblasts TGAGAGACCA (2) TTTTCTATGT (2) 10.5 0.0105 E15 cortex CTTTTCAGTT 9.9 0.0099 P1 cortex AAGGAGGTGG (2) ACTCCTCAAA (2) GTTACTGTAA 13.5 0.0135 Hypothalamus TGAGAGACCA (2) TTTTCTATGT (2) 3.6 0.0036 E12.5 retina ATGAGAAATA GTTACTGTAA 3.8 0.0038 E14.5 retina AAGGAGGTGG (2) CTTTTCAGTT TGAGAGACCA (2) 12.7 0.0127 E16.5 retina AAGGAGGTGG (2) ACTCCTCAAA (2) TGAGAGACCA (2) TTTTCTATGT (2) 9 0.009 E18.5 retina GTTACTGTAA TGAGAGACCA (2) 5.4 0.0054 P0.5 retina AAGGAGGTGG (2) ATGAGAAATA TGAGAGACCA (2) 13.8 0.0138 P2.5 retina GTTACTGTAA TGAGAGACCA (2) TTTTCTATGT (2) 7.1 0.0071 P4.5 retina ATGAGAAATA GTTACTGTAA TGAGAGACCA (2) TTTTCTATGT (2) 12 0.012 P6.5 retina TGAGAGACCA (2) 5 0.005 P10.5 crx- retina ATGAGAAATA TGAGAGACCA (2) 5.6 0.0056 P10.5 crx+ retina ATGAGAAATA TGAGAGACCA (2) 7.7 0.0077 Adult retinal TGAGAGACCA (2) TTTTCTATGT (2) 9.3 0.0093 ONL AAGGAGGTGG (2) ACTCCTCAAA (2) 3.8 0.0038