| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CTGAAGATTC (3) TAAGAAATAA TGGCTCCTTT
| 8.1 | 0.0081 |
| P8 GC+1d culture | CTGAAGATTC (3) GTCTCCTTTG (2) TGGCTCCTTT
| 6.8 | 0.0068 |
| P8 GC+SHH+1d culture | AAGAAATTAA ACACTTTTAT (3) CTGAAGATTC (3) GTCTCCTTTG (2) TGGCTCCTTT
| 7.1 | 0.0071 |
| 3T3 fibroblasts | AAGAAATTAA TGGCTCCTTT
| 7 | 0.007 |
| E15 cortex | ATTACAGCCA (2) CTGAAGATTC (3)
| 9.8 | 0.0098 |
| P1 cortex | ATTACAGCCA (2) CTGAAGATTC (3) GTCTCCTTTG (2) TAAGAAATAA
| 31.7 | 0.0317 |
| Hypothalamus | ATTACAGCCA (2) TAAGAAATAA
| 3.6 | 0.0036 |
| E12.5 retina | ACACTTTTAT (3) TAAGAAATAA
| 3.8 | 0.0038 |
| E14.5 retina | ACACTTTTAT (3) TTCTCTCTCT (2)
| 7.3 | 0.0073 |
| E16.5 retina | ACACTTTTAT (3) CTGAAGATTC (3) GTCTCCTTTG (2) TAAGAAATAA TGGCTCCTTT
| 18.1 | 0.0181 |
| E18.5 retina | AAGAAATTAA TAAGAAATAA TGGCTCCTTT
| 7.2 | 0.0072 |
| P0.5 retina | TAAGAAATAA TGGCTCCTTT
| 5.9 | 0.0059 |
| P4.5 retina | CTGAAGATTC (3) GTCTCCTTTG (2) TAAGAAATAA
| 8 | 0.008 |
| P6.5 retina | AAGAAATTAA CTGAAGATTC (3) TGGCTCCTTT
| 5.1 | 0.0051 |
| P10.5 crx- retina | GTCTCCTTTG (2) TGGCTCCTTT
| 5.6 | 0.0056 |
| P10.5 crx+ retina | GTCTCCTTTG (2) TAAGAAATAA
| 3.8 | 0.0038 |
| Adult retinal | ACACTTTTAT (3) CTGAAGATTC (3) GTCTCCTTTG (2) TTCTCTCTCT (2)
| 9.4 | 0.0094 |
| ONL | ATTACAGCCA (2) TTCTCTCTCT (2)
| 5.7 | 0.0057 |