Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.332840	Ptcd1	pentatricopeptide repeat domain 1	5		71799
Human Homolog	PTCD1[pentatricopeptide repeat domain 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 91 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGCTGTACAG (3) CGCGAGGCAT (3) TCTACAAGAA (3) TGACTGTCTG 78.2 0.0782 Cb medulloblastoma AGCTGTACAG (3) ATGGTTTAAT CTTCCCCCCC GGCCCCTGGT TCTACAAGAA (3) TGACTGTCTG 41.5 0.0415 P8 GC+1d culture AGCTGTACAG (3) CGCGAGGCAT (3) CTTCCCCCCC TCTACAAGAA (3) TGACTGTCTG 141.5 0.1415 P8 GC+SHH+1d culture AGCTGTACAG (3) CGCGAGGCAT (3) CTTCCCCCCC GGCCCCTGGT TCTACAAGAA (3) TGACTGTCTG 159.2 0.1592 3T3 fibroblasts AGCTGTACAG (3) CGCGAGGCAT (3) CTTCCCCCCC TCTACAAGAA (3) TGACTGTCTG 63.1 0.0631 E15 cortex AGCTGTACAG (3) CTTCCCCCCC GGCCCCTGGT TCTACAAGAA (3) 59.3 0.0593 P1 cortex AGCTGTACAG (3) CTTCCCCCCC TCTACAAGAA (3) TGACTGTCTG 86.2 0.0862 Hypothalamus AGCTGTACAG (3) ATGGTTTAAT CTTCCCCCCC TCTACAAGAA (3) TGACTGTCTG 61.5 0.0615 E12.5 retina AGCTGTACAG (3) CGCGAGGCAT (3) GGCCCCTGGT TCTACAAGAA (3) 154 0.154 E14.5 retina AGCTGTACAG (3) CGCGAGGCAT (3) TCTACAAGAA (3) 82 0.082 E16.5 retina AGCTGTACAG (3) CGCGAGGCAT (3) CTTCCCCCCC TCTACAAGAA (3) TGACTGTCTG 90.5 0.0905 E18.5 retina AGCTGTACAG (3) CGCGAGGCAT (3) CTTCCCCCCC GGCCCCTGGT TCTACAAGAA (3) TGACTGTCTG TGGAAGCACT (2) 56.3 0.0563 P0.5 retina AGCTGTACAG (3) GGCCCCTGGT TCTACAAGAA (3) TGACTGTCTG 84.3 0.0843 P2.5 retina AGCTGTACAG (3) GGCCCCTGGT TCTACAAGAA (3) TGACTGTCTG 82.7 0.0827 P4.5 retina AGCTGTACAG (3) TCTACAAGAA (3) TGACTGTCTG TGGAAGCACT (2) 43.7 0.0437 P6.5 retina AGCTGTACAG (3) GGCCCCTGGT TCTACAAGAA (3) TGACTGTCTG TGGAAGCACT (2) 61.7 0.0617 P10.5 crx- retina AGCTGTACAG (3) GGCCCCTGGT TCTACAAGAA (3) TGACTGTCTG 65.1 0.0651 P10.5 crx+ retina AGCTGTACAG (3) TCTACAAGAA (3) TGACTGTCTG TGGAAGCACT (2) 55.7 0.0557 Adult retinal AGCTGTACAG (3) CGCGAGGCAT (3) CTTCCCCCCC TCTACAAGAA (3) TGACTGTCTG 52 0.052 ONL AGCTGTACAG (3) TCTACAAGAA (3) TGACTGTCTG 24.9 0.0249