Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]
Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24

 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.333388 Chd4chromodomain helicase DNA binding protein 4 6  6 58.4 cM  107932 
 Gene Ontology ATP binding | ATP dependent helicase activity | chromatin | chromatin assembly/disassembly | chromatin binding | chromatin modification | DNA binding | helicase activity | nucleic acid binding | nucleus | regulation of transcription, DNA-dependent
 Human Homolog CHD4[chromodomain helicase DNA binding protein 4]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 137 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCAATGAATATT (2)
ATGGCTCACA
CCCGAACTGG
CGTCAGGAGG
CTTGGCTGCA
GAAGCAGGAC
GGCCCCGCCC (3)
TCTTACTGGC (2)
TGCAGGAGCT
TGGAAATGAA
220.30.2203
Cb medulloblastomaATGGCTCACA
GAAGCAGGAC
GGCCCCGCCC (3)
129.50.1295
P8 GC+1d cultureATGGCTCACA
CCCGAACTGG
GAAGCAGGAC
GCGGGCGGGC (2)
GGAACAGAGA (2)
GGCCCCGCCC (3)
TCTTACTGGC (2)
TGCAGGAGCT
249.90.2499
P8 GC+SHH+1d cultureATGGCTCACA
CCCGAACTGG
GAAGCAGGAC
GCGGGCGGGC (2)
GGCCCCGCCC (3)
TCTTACTGGC (2)
TGCAGGAGCT
TGGAAATGAA
227.10.2271
3T3 fibroblastsATGGCTCACA
CACCTGCACA (3)
CCCGAACTGG
GAAGCAGGAC
GCGGGCGGGC (2)
GGCCCCGCCC (3)
GTGACAGCTA (3)
TGCAGGAGCT
199.70.1997
E15 cortexAATGAATATT (2)
ATGGCTCACA
CCCGAACTGG
CCCTTCTTTC (2)
CTGGGGGCTC
GAAGCAGGAC
GGCCCCGCCC (3)
GTGACAGCTA (3)
TGCAGGAGCT
341.40.3414
P1 cortexAATGAATATT (2)
ATGGCTCACA
CTGGGGGCTC
GAAGCAGGAC
TGCAGGAGCT
213.50.2135
HypothalamusATGGCTCACA
CTGGGGGCTC
GAAGCAGGAC
GCGGGCGGGC (2)
GGCCCCGCCC (3)
TGCAGGAGCT
235.40.2354
E12.5 retinaATGGCTCACA
CCCGAACTGG
GAAGCAGGAC
GGCCCCGCCC (3)
TCTTACTGGC (2)
TGCAGGAGCT
304.20.3042
E14.5 retinaATGGCTCACA
CCCGAACTGG
GAAGCAGGAC
GCGGGCGGGC (2)
GGAACAGAGA (2)
TGCAGGAGCT
2350.235
E16.5 retinaATGGCTCACA
CACCTGCACA (3)
CTTGGCTGCA
GAAGCAGGAC
GCGGGCGGGC (2)
GGCCCCGCCC (3)
TGCAGGAGCT
TTTATTGATT
244.50.2445
E18.5 retinaATGGCTCACA
CCCGAACTGG
CTTGGCTGCA
GAAGCAGGAC
GCGGGCGGGC (2)
GGCCCCGCCC (3)
TGCAGGAGCT
258.20.2582
P0.5 retinaATGGCTCACA
GAAGCAGGAC
GGAACAGAGA (2)
GGCCCCGCCC (3)
TGCAGGAGCT
192.40.1924
P2.5 retinaATGGCTCACA
CCCGAACTGG
CTGGGGGCTC
CTTGGCTGCA
GAAGCAGGAC
GCGGGCGGGC (2)
GGCCCCGCCC (3)
TCTTACTGGC (2)
TGCAGGAGCT
TTTATTGATT
255.30.2553
P4.5 retinaATGGCTCACA
CCCGAACTGG
CTTGGCTGCA
GAAGCAGGAC
GCGGGCGGGC (2)
GGCCCCGCCC (3)
GTGACAGCTA (3)
TGCAGGAGCT
291.40.2914
P6.5 retinaATGGCTCACA
CTGGGGGCTC
CTTGGCTGCA
GAAGCAGGAC
GGAACAGAGA (2)
TGCAGGAGCT
TGGAAATGAA
228.50.2285
P10.5 crx- retinaATGGCTCACA
CGTCAGGAGG
CTTGGCTGCA
GAAGCAGGAC
GCGGGCGGGC (2)
GGCCCCGCCC (3)
TCTTACTGGC (2)
TGCAGGAGCT
1190.119
P10.5 crx+ retinaATGGCTCACA
GAAGCAGGAC
GGCCCCGCCC (3)
TCTTACTGGC (2)
TGCAGGAGCT
TTTATTGATT
213.30.2133
Adult retinalATGGCTCACA
CCCTTCTTTC (2)
GAAGCAGGAC
TCTTACTGGC (2)
TGCAGGAGCT
101.90.1019
ONLATGGCTCACA
GAAGCAGGAC
TCTTACTGGC (2)
TGCAGGAGCT
82.30.0823