Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.333515
2810474O19Rik
RIKEN cDNA 2810474O19 gene
6
67246
Mm.333515
6720435I21Rik
RIKEN cDNA 6720435I21 gene
6
77734
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 42 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AACATTCCCT (
2
)
TGGTTGCTGG
TTGGTTTTCA
(
2
)
75
0.075
Cb medulloblastoma
ACCTTGGAAG (
8
)
TGGTTGCTGG
115.6
0.1156
P8 GC+1d culture
ACCTTGGAAG (
8
)
GTAAAGACTT
(
3
)
TGGTTGCTGG
59.3
0.0593
P8 GC+SHH+1d culture
ACCTTGGAAG (
8
)
TGGTTGCTGG
91.3
0.0913
3T3 fibroblasts
TGGTTGCTGG
220.8
0.2208
E15 cortex
TGGTTGCTGG
277.1
0.2771
P1 cortex
GTAAAGACTT
(
3
)
TCTTTCTCTT
(
4
)
TGGTTGCTGG
95.4
0.0954
Hypothalamus
TGGTTGCTGG
TTGGTTTTCA
(
2
)
355
0.355
E12.5 retina
AACATTCCCT (
2
)
TGGTTGCTGG
159.6
0.1596
E14.5 retina
TGGTTGCTGG
936.5
0.9365
E16.5 retina
AACATTCCCT (
2
)
TGGTTGCTGG
769.7
0.7697
E18.5 retina
TGGTTGCTGG
252.8
0.2528
P0.5 retina
ACCTTGGAAG (
8
)
GTAAAGACTT
(
3
)
TGGTTGCTGG
194.4
0.1944
P2.5 retina
TGGTTGCTGG
165.4
0.1654
P4.5 retina
AACATTCCCT (
2
)
TCTTTCTCTT
(
4
)
TGGTTGCTGG
154.6
0.1546
P6.5 retina
ACCTTGGAAG (
8
)
TGGTTGCTGG
TTGGTTTTCA
(
2
)
161.7
0.1617
P10.5 crx- retina
ACCTTGGAAG (
8
)
TGGTTGCTGG
286.1
0.2861
P10.5 crx+ retina
ACCTTGGAAG (
8
)
TGGTTGCTGG
TTGGTTTTCA
(
2
)
111.5
0.1115
Adult retinal
ACCTTGGAAG (
8
)
TGGTTGCTGG
218.5
0.2185
ONL
TCTTTCTCTT
(
4
)
TGGTTGCTGG
400.3
0.4003
