| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CCTGAAGATG (3) CTCTTCAACC GGGAAGGCAG TCCCAGGTCC (2) TCTTCCCCTC
| 9.7 | 0.0097 |
| Cb medulloblastoma | GGGAAGGCAG TCTTCCCCTC
| 4.6 | 0.0046 |
| P8 GC+1d culture | ATGGTGGAAG CCTGAAGATG (3) GCGTTGTCCA (2) GGGAAGGCAG TCTTCCCCTC
| 12.4 | 0.0124 |
| P8 GC+SHH+1d culture | ATGGTGGAAG CCTGAAGATG (3) GCGTTGTCCA (2) TCCCAGGTCC (2)
| 5.9 | 0.0059 |
| 3T3 fibroblasts | CCTGAAGATG (3) GCGTTGTCCA (2) GGGAAGGCAG
| 10.5 | 0.0105 |
| E15 cortex | TCTTCCCCTC
| 4.9 | 0.0049 |
| P1 cortex | CCTGAAGATG (3)
| 4.5 | 0.0045 |
| Hypothalamus | CCTGAAGATG (3) CTCTTCAACC GCGTTGTCCA (2) TCTTCCCCTC
| 7.2 | 0.0072 |
| E12.5 retina | CCTGAAGATG (3) GCGTTGTCCA (2)
| 3.8 | 0.0038 |
| E14.5 retina | CCTGAAGATG (3)
| 1.8 | 0.0018 |
| E16.5 retina | GCGTTGTCCA (2) TCCCAGGTCC (2) TCTTCCCCTC
| 16.3 | 0.0163 |
| E18.5 retina | GGGAAGGCAG
| 1.8 | 0.0018 |
| P0.5 retina | ATGGTGGAAG CCTGAAGATG (3) CTCTTCAACC
| 6 | 0.006 |
| P2.5 retina | GCGTTGTCCA (2)
| 1.8 | 0.0018 |
| P4.5 retina | GGGAAGGCAG
| 2 | 0.002 |
| P6.5 retina | CCTGAAGATG (3) CTCTTCAACC GCGTTGTCCA (2)
| 6.7 | 0.0067 |
| P10.5 crx- retina | CCTGAAGATG (3)
| 5.6 | 0.0056 |
| P10.5 crx+ retina | GCGTTGTCCA (2)
| 1.9 | 0.0019 |
| Adult retinal | CCTGAAGATG (3) GCGTTGTCCA (2) GGGAAGGCAG TCTTCCCCTC
| 13.1 | 0.0131 |
| ONL | CCTGAAGATG (3)
| 3.8 | 0.0038 |