Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.333893	Nipa2	non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)	7		93790
Human Homolog	NIPA2[non imprinted in Prader-Willi/Angelman syndrome 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 68 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCGAATATTC (2) GAGGAGGTGG (2) GCTAATTTCT (3) GGAAAATTGG TCCTTAAAAA TGCCAAATAA TTTGAGGATT (2) 17.8 0.0178 Cb medulloblastoma TTTGAGGATT (2) 2.3 0.0023 P8 GC+1d culture GCTAATTTCT (3) TCCTTAAAAA TGCCAAATAA 4.5 0.0045 P8 GC+SHH+1d culture CCGAATATTC (2) GAAACAGCAA GAGGAGGGGG (3) GCTAATTTCT (3) TTTGAGGATT (2) 12.9 0.0129 3T3 fibroblasts CCGAATATTC (2) 3.5 0.0035 E15 cortex CCGAATATTC (2) GCTAATTTCT (3) 9.8 0.0098 P1 cortex GCTAATTTCT (3) GGAAAATGGG GGAAAATTGG TCCTTAAAAA 18 0.018 Hypothalamus CCGAATATTC (2) GAGGAGGGGG (3) GAGGAGGTGG (2) GCTAATTTCT (3) TGCCAAATAA TTTGAGGATT (2) 10.8 0.0108 E12.5 retina GAAACAGCAA TCCTTAAAAA 3.8 0.0038 E14.5 retina GAGGAGGGGG (3) GAGGAGGTGG (2) GGAAAATTGG TTTGAGGATT (2) 10.8 0.0108 E16.5 retina CCGAATATTC (2) GAAACAGCAA GAGGAGGTGG (2) TTTGAGGATT (2) 9 0.009 E18.5 retina GGAAAATGGG GGAAAATTGG TCCTTAAAAA TTTGAGGATT (2) 9 0.009 P0.5 retina CCGAATATTC (2) GAAACAGCAA GGAAAATTGG TCCTTAAAAA 13.8 0.0138 P2.5 retina CCGAATATTC (2) GAAACAGCAA GGAAAATGGG GGAAAATTGG TCCTTAAAAA TTTGAGGATT (2) 14.3 0.0143 P4.5 retina CCGAATATTC (2) GAAACAGCAA 4 0.004 P6.5 retina GAAACAGCAA GGCTTCTTCT (2) TCCTTAAAAA TTTGAGGATT (2) 13.3 0.0133 P10.5 crx- retina CCGAATATTC (2) TTTGAGGATT (2) 9.3 0.0093 P10.5 crx+ retina GAAACAGCAA TGCCAAATAA TTTGAGGATT (2) 5.7 0.0057 Adult retinal GAGGAGGTGG (2) 1.9 0.0019 ONL GAAACAGCAA GAGGAGGGGG (3) TTTGAGGATT (2) 13.4 0.0134