Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3350	D830031N03Rik	RIKEN cDNA D830031N03 gene			442834
Mm.3350	Macf1	microtubule-actin crosslinking factor 1	4	4 57.4 cM	11426
Gene Ontology	actin binding | actin cytoskeleton | calcium ion binding | cell cycle arrest | cell motility | cytoskeleton | establishment and/or maintenance of cell polarity | microtubule binding | microtubule cytoskeleton
Human Homolog	MACF1[microtubule-actin crosslinking factor 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 146 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGTTAAAAA GAAAACAAAA GGAGCCATTG (3) TGGTGCAGGG (2) TTGCTGTGTG (2) TTTGCTGTGT 66.8 0.0668 Cb medulloblastoma ATGTTAAAAA CTTTCTTCTC (2) GAAAACAAAA GGAGCCATTG (3) GTCAGAGCTG (2) TGGTGCAGGG (2) TTGCTGTGTG (2) 80.8 0.0808 P8 GC+1d culture ATGTTAAAAA CTTTCTTCTC (2) GAAAACAAAA GGAGCCATTG (3) GTCAGAGCTG (2) TAAAATATAT (3) TGCCCGTCCC (3) TTGCTGTGTG (2) TTTGCTGTGT 59.1 0.0591 P8 GC+SHH+1d culture ATGTTAAAAA GAAAACAAAA GGAGCCATTG (3) GTCAGAGCTG (2) TGGTGCAGGG (2) TTCTAAAAAA (3) TTGCTGTGTG (2) TTTGCTGTGT 84.2 0.0842 3T3 fibroblasts ATATAGCAAA (2) GGAGCCATTG (3) TTGCTGTGTG (2) TTTGCTGTGT 66.6 0.0666 E15 cortex GGAGCCATTG (3) GTCAGAGCTG (2) TGGTGCAGGG (2) TTGCTGTGTG (2) 24.6 0.0246 P1 cortex ATGTTAAAAA GGAGCCATTG (3) TTGCTGTGTG (2) TTTGCTGTGT 31.7 0.0317 Hypothalamus ATATAGCAAA (2) ATGTTAAAAA GAAAACAAAA GGAGCCATTG (3) GTCAGAGCTG (2) TGCCCGTCCC (3) TGGTGCAGGG (2) TTGCTGTGTG (2) TTTGCTGTGT 72.4 0.0724 E12.5 retina ATATAGCAAA (2) ATGTTAAAAA CTTTCTTCTC (2) GGAGCCATTG (3) GTCAGAGCTG (2) TGGTGCAGGG (2) TTGCTGTGTG (2) TTTGCTGTGT 50.8 0.0508 E14.5 retina ATATAGCAAA (2) ATGTTAAAAA GAAAACAAAA GGAGCCATTG (3) GTCAGAGCTG (2) TGGTGCAGGG (2) TTGCTGTGTG (2) TTTGCTGTGT 49.1 0.0491 E16.5 retina ATGTTAAAAA GAAAACAAAA GGAGCCATTG (3) GTCAGAGCTG (2) TGGTGCAGGG (2) TTGCTGTGTG (2) TTTGCTGTGT 43.5 0.0435 E18.5 retina ATGTTAAAAA GAAAACAAAA GGAGCCATTG (3) GTCAGAGCTG (2) TTCTAAAAAA (3) TTGCTGTGTG (2) TTTGCTGTGT 96.3 0.0963 P0.5 retina ATGTTAAAAA CTTTCTTCTC (2) GAAAACAAAA GGAGCCATTG (3) GTCAGAGCTG (2) TGGTGCAGGG (2) TTCTAAAAAA (3) TTGCTGTGTG (2) TTTGCTGTGT 64.8 0.0648 P2.5 retina ATATAGCAAA (2) ATGTTAAAAA GAAAACAAAA GGAGCCATTG (3) GTCAGAGCTG (2) TGCCCGTCCC (3) TGGTGCAGGG (2) TTCTAAAAAA (3) TTGCTGTGTG (2) TTTGCTGTGT 93.5 0.0935 P4.5 retina ATGTTAAAAA GAAAACAAAA GGAGCCATTG (3) GTCAGAGCTG (2) TGCCCGTCCC (3) TGGTGCAGGG (2) TTGCTGTGTG (2) TTTGCTGTGT 85.3 0.0853 P6.5 retina ATGTTAAAAA GAAAACAAAA GGAGCCATTG (3) TGCCCGTCCC (3) TGGTGCAGGG (2) TTGCTGTGTG (2) TTTGCTGTGT 96.7 0.0967 P10.5 crx- retina GAAAACAAAA GGAGCCATTG (3) GTCAGAGCTG (2) TAAAATATAT (3) TGGTGCAGGG (2) TTGCTGTGTG (2) TTTGCTGTGT 94.8 0.0948 P10.5 crx+ retina ATATAGCAAA (2) ATGTTAAAAA GAAAACAAAA GGAGCCATTG (3) GTCAGAGCTG (2) TGCCCGTCCC (3) TGGTGCAGGG (2) TTGCTGTGTG (2) TTTGCTGTGT 92.2 0.0922 Adult retinal ATGTTAAAAA GGAGCCATTG (3) GTCAGAGCTG (2) TGCCCGTCCC (3) TGGTGCAGGG (2) TTGCTGTGTG (2) TTTGCTGTGT 70.4 0.0704 ONL ATGTTAAAAA CTTTCTTCTC (2) GAAAACAAAA GGAGCCATTG (3) GTCAGAGCTG (2) TAAAATATAT (3) TGCCCGTCCC (3) TTGCTGTGTG (2) 45.8 0.0458