Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.335350	Zic1	zinc finger protein of the cerebellum 1	9	9 61.0 cM	22771
Gene Ontology	behavior | central nervous system development | central nervous system development | development | DNA binding | neurogenesis | nucleic acid binding | nucleus | zinc ion binding
Human Homolog	ZIC1[Zic family member 1 (odd-paired homolog, Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATGTGAACA ATTTGCGCCT CACGAGCTGG (2) CGGATAAATA TATTTCAAAA (3) TCCTGTCAAG TGTTTCACAG (3) TTACAGCTAT 142 0.142 Cb medulloblastoma AATGTGAACA ATTTGCGCCT CGGATAAATA TATTTCAAAA (3) TATTTCTAAA (2) TCCTGTCAAG TTACAGCTAT 48.5 0.0485 P8 GC+1d culture AATGTGAACA ATTTGCGCCT CACGAGCTGG (2) TATTTCAAAA (3) TATTTCTAAA (2) TCCTGTCAAG TGTTTCACAG (3) TTACAGCTAT 162.1 0.1621 P8 GC+SHH+1d culture AATGTGAACA ATTTGCGCCT CACGAGCTGG (2) CGGATAAATA TATTTCAAAA (3) TATTTCTAAA (2) TCCTGTCAAG TGTTTCACAG (3) TTACAGCTAT 120.6 0.1206 E15 cortex TATTTCTAAA (2) 4.9 0.0049 Hypothalamus AATGTGAACA TATTTCAAAA (3) TATTTCTAAA (2) TCCTGTCAAG TTACAGCTAT 16.2 0.0162 E12.5 retina AATGTGAACA ATTTGCGCCT TTACAGCTAT 11.3 0.0113 E14.5 retina TATTTCAAAA (3) TTACAGCTAT 12.8 0.0128 E16.5 retina TATTTCAAAA (3) TATTTCTAAA (2) TCCTGTCAAG TTACAGCTAT 9 0.009 E18.5 retina TATTTCAAAA (3) 1.8 0.0018 P0.5 retina TTACAGCTAT 2 0.002 P2.5 retina TATTTCAAAA (3) 3.5 0.0035 P4.5 retina TATTTCAAAA (3) TTACAGCTAT 6 0.006 P6.5 retina CACGAGCTGG (2) TATTTCAAAA (3) TATTTCTAAA (2) 5.1 0.0051 P10.5 crx+ retina TATTTCAAAA (3) TATTTCTAAA (2) 3.8 0.0038 Adult retinal TATTTCAAAA (3) 1.9 0.0019 ONL TATTTCAAAA (3) 1.9 0.0019