Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.335385	Pccb	propionyl Coenzyme A carboxylase, beta polypeptide	9		66904
Mm.335385	6720484G13Rik	RIKEN cDNA 6720484G13 gene	9		77696
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 74 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CGGGCTCCAC (2) GGACAGCACA GGCTCAGGTG (2) GGGTGGGGGA (3) GTGTGATACA (2) 16.3 0.0163 Cb medulloblastoma GGCTCAGGTG (2) GGTGCTGGGA (2) GTGAGGACAC (2) 6.9 0.0069 P8 GC+1d culture AAAAAATGGA (3) CGGGCTCCAC (2) GGACAGCACA GGCTCAGGTG (2) GTGAGGACAC (2) GTGTGATACA (2) TCAAAAAAGA 14.8 0.0148 P8 GC+SHH+1d culture CGGGCTCCAC (2) GGCTCAGGTG (2) GGGTGGGGGA (3) GTGAGGACAC (2) TCAAAAAAGA 15.3 0.0153 3T3 fibroblasts GGACAGCACA GTGAGGACAC (2) 10.5 0.0105 E15 cortex CGGGCTCCAC (2) GGACAGCACA GGCCCGTGTG (2) GGTGCTGGGA (2) 29.6 0.0296 P1 cortex CGGGCTCCAC (2) GGCCCGTGTG (2) GGGTGGGGGA (3) 18.1 0.0181 Hypothalamus CGGGCTCCAC (2) GGCTCAGGTG (2) GGGTGGGGGA (3) GGTGCTGGGA (2) 18.1 0.0181 E12.5 retina AAAAAATGGA (3) CGGGCTCCAC (2) GGCTCAGGTG (2) GGGTGGGGGA (3) GGTGCTGGGA (2) 11.4 0.0114 E14.5 retina AAAAAATGGA (3) GGTGCTGGGA (2) TCAAAAAAGA 7.2 0.0072 E16.5 retina AAAAAATGGA (3) CGGGCTCCAC (2) GGACAGCACA GGCCCGTGTG (2) TCAAAAAAGA 9 0.009 E18.5 retina CGGGCTCCAC (2) GGGTGGGGGA (3) 3.6 0.0036 P0.5 retina CACACAACAA (2) CGGGCTCCAC (2) GGCTCAGGTG (2) GGTGCTGGGA (2) GTGAGGACAC (2) 11.9 0.0119 P2.5 retina GGCTCAGGTG (2) GGTGCTGGGA (2) 3.6 0.0036 P4.5 retina CGGGCTCCAC (2) GGGTGGGGGA (3) 7.9 0.0079 P6.5 retina AAAAAATGGA (3) CACACAACAA (2) CGGGCTCCAC (2) GGCTCAGGTG (2) GGGTGGGGGA (3) GGTGCTGGGA (2) GTGAGGACAC (2) TCAAAAAAGA 28.3 0.0283 P10.5 crx- retina CGGGCTCCAC (2) GGGTGGGGGA (3) 14.9 0.0149 P10.5 crx+ retina CGGGCTCCAC (2) GGGTGGGGGA (3) GGTGCTGGGA (2) GTGAGGACAC (2) 15.3 0.0153 Adult retinal GGGTGGGGGA (3) GGTGCTGGGA (2) 9.3 0.0093 ONL GGTGCTGGGA (2) 5.7 0.0057