| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CTGAAAAAAA (2) GGGTGGGAAG (3) TGAAAAAAAA (2) TGGTTGCTGG
| 110.9 | 0.1109 |
| Cb medulloblastoma | AGACAAGGAG CTGAAAAAAA (2) TGAAAAAAAA (2) TGGTTGCTGG
| 212.7 | 0.2127 |
| P8 GC+1d culture | CTGAAAAAAA (2) GCCAGCACAG (2) GGGTGGGAAG (3) TGAAAAAAAA (2) TGGTTGCTGG
| 107.4 | 0.1074 |
| P8 GC+SHH+1d culture | CTGAAAAAAA (2) GGGTGGGAAG (3) TGAAAAAAAA (2) TGGTTGCTGG
| 180.3 | 0.1803 |
| 3T3 fibroblasts | GCCAGCACAG (2) GGGTGGGAAG (3) TGAAAAAAAA (2) TGGTTGCTGG
| 259.3 | 0.2593 |
| E15 cortex | CTGAAAAAAA (2) GGGTGGGAAG (3) TGAAAAAAAA (2) TGGTTGCTGG
| 341.4 | 0.3414 |
| P1 cortex | CTGAAAAAAA (2) GGGTGGGAAG (3) TGAAAAAAAA (2) TGGTTGCTGG
| 99.9 | 0.0999 |
| Hypothalamus | CTGAAAAAAA (2) GGGTGGGAAG (3) TGAAAAAAAA (2) TGGTTGCTGG
| 403.9 | 0.4039 |
| E12.5 retina | CTGAAAAAAA (2) GGGTGGGAAG (3) TGAAAAAAAA (2) TGGTTGCTGG
| 217.8 | 0.2178 |
| E14.5 retina | CTGAAAAAAA (2) GGGTGGGAAG (3) TGAAAAAAAA (2) TGGTTGCTGG
| 1005.8 | 1.0058 |
| E16.5 retina | CTGAAAAAAA (2) GCCAGCACAG (2) GGGTGGGAAG (3) TGAAAAAAAA (2) TGGTTGCTGG
| 809.5 | 0.8095 |
| E18.5 retina | CTGAAAAAAA (2) GGGTGGGAAG (3) TGAAAAAAAA (2) TGGTTGCTGG
| 360.2 | 0.3602 |
| P0.5 retina | CTGAAAAAAA (2) GGGTGGGAAG (3) TGAAAAAAAA (2) TGGTTGCTGG
| 223.8 | 0.2238 |
| P2.5 retina | CTGAAAAAAA (2) GGGTGGGAAG (3) TGAAAAAAAA (2) TGGTTGCTGG
| 256.9 | 0.2569 |
| P4.5 retina | CTGAAAAAAA (2) GCCAGCACAG (2) GGGTGGGAAG (3) TGAAAAAAAA (2) TGGTTGCTGG
| 218 | 0.218 |
| P6.5 retina | CTGAAAAAAA (2) GCCAGCACAG (2) GGGTGGGAAG (3) TGAAAAAAAA (2) TGGTTGCTGG
| 230 | 0.23 |
| P10.5 crx- retina | AGACAAGGAG CTGAAAAAAA (2) GGGTGGGAAG (3) TGAAAAAAAA (2) TGGTTGCTGG
| 304.7 | 0.3047 |
| P10.5 crx+ retina | AGACAAGGAG CTGAAAAAAA (2) GGGTGGGAAG (3) TGAAAAAAAA (2) TGGTTGCTGG
| 138.4 | 0.1384 |
| Adult retinal | CTGAAAAAAA (2) GGGTGGGAAG (3) TGAAAAAAAA (2) TGGTTGCTGG
| 238.9 | 0.2389 |
| ONL | CTGAAAAAAA (2) GGGTGGGAAG (3) TGAAAAAAAA (2) TGGTTGCTGG
| 427.1 | 0.4271 |