| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CTCGAGTCTC (3) GCTGGCTGGC (3) TGCAGTGGTG
| 47.2 | 0.0472 |
| P8 GC+1d culture | CTCGAGTCTC (3) GCTGGCTGGC (3) TATATGAAAT TGCAGTGGTG
| 20.4 | 0.0204 |
| P8 GC+SHH+1d culture | CTCGAGTCTC (3) GCTGGCTGGC (3) TGCAGTGGTG
| 38.7 | 0.0387 |
| 3T3 fibroblasts | CTCGAGTCTC (3) GCTGGCTGGC (3)
| 178.7 | 0.1787 |
| E15 cortex | CTCGAGTCTC (3)
| 19.8 | 0.0198 |
| P1 cortex | CTCGAGTCTC (3) GCTGGCTGGC (3)
| 18.1 | 0.0181 |
| Hypothalamus | CTCGAGTCTC (3) TATATGAAAT
| 5.4 | 0.0054 |
| E12.5 retina | CTCGAGTCTC (3)
| 30 | 0.03 |
| E14.5 retina | CTCGAGTCTC (3) GCTGGCTGGC (3)
| 10.9 | 0.0109 |
| E16.5 retina | CTCGAGTCTC (3)
| 9.1 | 0.0091 |
| E18.5 retina | CTCGAGTCTC (3)
| 7.3 | 0.0073 |
| P0.5 retina | CTCGAGTCTC (3) GCTGGCTGGC (3) TGCAGTGGTG
| 41.3 | 0.0413 |
| P2.5 retina | CTCGAGTCTC (3)
| 10.6 | 0.0106 |
| P4.5 retina | CTCGAGTCTC (3) TATATGAAAT
| 4 | 0.004 |
| P6.5 retina | CTCGAGTCTC (3)
| 13.3 | 0.0133 |
| P10.5 crx- retina | CTCGAGTCTC (3)
| 11.1 | 0.0111 |
| P10.5 crx+ retina | CTCGAGTCTC (3) GCTGGCTGGC (3)
| 9.6 | 0.0096 |
| Adult retinal | CTCGAGTCTC (3)
| 11.1 | 0.0111 |
| ONL | CTCGAGTCTC (3)
| 3.8 | 0.0038 |