Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.33596	Itga4	integrin alpha 4	2	2 46.0 cM	16401
Gene Ontology	cell adhesion | cell migration | cell-matrix adhesion | heart development | integral to membrane | integrin complex | integrin-mediated signaling pathway | protein binding | receptor activity
Human Homolog	ITGA4[integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 27 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCTTCTGCTT (2) TGCTTCTGCT (2) 6.6 0.0066 P8 GC+1d culture GCTCTAGCTG GCTTCTGCTT (2) 6.9 0.0069 P8 GC+SHH+1d culture GCTCTAGCTG GCTTCTGCTT (2) 4.7 0.0047 3T3 fibroblasts GCTTCTGCTT (2) 3.5 0.0035 E15 cortex GCTCTAGCTG TGCTTCTGCT (2) 9.8 0.0098 Hypothalamus GCTTCTGCTT (2) TGCTTCTGCT (2) 3.6 0.0036 E12.5 retina GCTCTAGCTG GCTTCTGCTT (2) 5.7 0.0057 E16.5 retina GCTTCTGCTT (2) 7.2 0.0072 P2.5 retina GCTTCTGCTT (2) TGCTTCTGCT (2) 5.3 0.0053 P6.5 retina TGCTTCTGCT (2) 1.7 0.0017 P10.5 crx- retina GCTTCTGCTT (2) 3.7 0.0037 P10.5 crx+ retina GCTCTAGCTG GCTTCTGCTT (2) TCTGATGATG (2) 7.6 0.0076 Adult retinal GCTTCTGCTT (2) TCTGATGATG (2) TGCTTCTGCT (2) 7.5 0.0075 ONL GCTCTAGCTG GCTTCTGCTT (2) TCTGATGATG (2) 11.4 0.0114