| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGCAGCTGG (2) CGCCATCATA (2) TTTTTTTTTT (2)
| 8.1 | 0.0081 |
| Cb medulloblastoma | GCAAGAAGCC (3) TTTTTTTTTT (2)
| 4.6 | 0.0046 |
| P8 GC+1d culture | AAGCAGCTGG (2) GCAAGAAGCC (3) TTTTTTTTTT (2)
| 15.9 | 0.0159 |
| P8 GC+SHH+1d culture | AACACAGCCT (2) GCAAGAAGCC (3) TTTTTTTTTT (2)
| 8.3 | 0.0083 |
| 3T3 fibroblasts | AACACAGCCT (2) CGCCATCATA (2)
| 7 | 0.007 |
| E15 cortex | TTTTTTTTTT (2)
| 4.9 | 0.0049 |
| P1 cortex | CGCCATCATA (2) TTTTTTTTTT (2)
| 9 | 0.009 |
| Hypothalamus | AAGCAGCTGG (2) CGCCATCATA (2) TTTTTTTTTT (2)
| 10.8 | 0.0108 |
| E12.5 retina | AACACAGCCT (2) CGCCATCATA (2) TTTTTTTTTT (2)
| 13.2 | 0.0132 |
| E14.5 retina | CGCCATCATA (2) TTTTTTTTTT (2)
| 31 | 0.031 |
| E16.5 retina | ATTACGCCAA CGCCATCATA (2) TTTTTTTTTT (2)
| 14.4 | 0.0144 |
| E18.5 retina | AACACAGCCT (2) CGCCATCATA (2) TTTTTTTTTT (2)
| 25.4 | 0.0254 |
| P0.5 retina | ATTACGCCAA CGCCATCATA (2) TTTTTTTTTT (2)
| 23.6 | 0.0236 |
| P2.5 retina | AACACAGCCT (2) AAGCAGCTGG (2) CGCCATCATA (2) GTCCAACACA TTTTTTTTTT (2)
| 26.4 | 0.0264 |
| P4.5 retina | AAGCAGCTGG (2) CGCCATCATA (2) TTTTTTTTTT (2)
| 21.8 | 0.0218 |
| P6.5 retina | AAGCAGCTGG (2) CGCCATCATA (2) TTTTTTTTTT (2)
| 15 | 0.015 |
| P10.5 crx- retina | CGCCATCATA (2) GCAAGAAGCC (3)
| 7.5 | 0.0075 |
| P10.5 crx+ retina | AACACAGCCT (2) CGCCATCATA (2) GTCCAACACA TTTTTTTTTT (2)
| 15.3 | 0.0153 |
| Adult retinal | ATTACGCCAA CGCCATCATA (2) TTTTTTTTTT (2)
| 18.5 | 0.0185 |
| ONL | CGCCATCATA (2) TTTTTTTTTT (2)
| 7.6 | 0.0076 |