| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TCTGGTTTTA TGACTGGCAG TGACTGGGAG (3) TTTACTGGAA
| 14.7 | 0.0147 |
| Cb medulloblastoma | TCTGGTTTTA TGACTGGCAG TGACTGGGAG (3) TTTAACTGAA
| 104 | 0.104 |
| P8 GC+1d culture | TCTGGTTTTA TGACTGGCAG TGACTGGGAG (3) TTTAACTGAA
| 29.6 | 0.0296 |
| P8 GC+SHH+1d culture | CAGGCAGGCA TCTGGTTTTA TGACTGGCAG TGACTGGGAG (3) TTTAACTGAA
| 16.5 | 0.0165 |
| 3T3 fibroblasts | CAGGCAGGCA TGACTGGGAG (3)
| 10.5 | 0.0105 |
| E15 cortex | TTTAACTGAA
| 4.9 | 0.0049 |
| Hypothalamus | CAGGCAGGCA TCTGGTTTTA TGACTGGCAG TGACTGGGAG (3) TTTAACTGAA
| 106.8 | 0.1068 |
| E12.5 retina | AGAATGGCAG TCTGGTTTTA TGACTGGGAG (3) TTTAACTGAA TTTACTGGAA
| 22.6 | 0.0226 |
| E14.5 retina | AGAATGGCAG TCTGGTTTTA TGACTGGCAG TGACTGGGAG (3) TTTAACTGAA
| 18.1 | 0.0181 |
| E16.5 retina | AGAATGGCAG TGACTGGGAG (3) TTTAACTGAA
| 21.7 | 0.0217 |
| E18.5 retina | AGAATGGCAG TCTGGTTTTA TGACTGGCAG TGACTGGGAG (3) TTTAACTGAA
| 10.8 | 0.0108 |
| P0.5 retina | AGAATGGCAG TGACTGGCAG TGACTGGGAG (3)
| 9.8 | 0.0098 |
| P2.5 retina | AGAATGGCAG TCTGGTTTTA TGACTGGCAG TGACTGGGAG (3)
| 35.2 | 0.0352 |
| P4.5 retina | AGAATGGCAG CAGGCAGGCA TGACTGGCAG TGACTGGGAG (3) TTTAACTGAA
| 33.6 | 0.0336 |
| P6.5 retina | TGACTGGCAG TGACTGGGAG (3) TTTAACTGAA TTTACTGGAA
| 31.8 | 0.0318 |
| P10.5 crx- retina | CAGGCAGGCA TGACTGGGAG (3)
| 26.1 | 0.0261 |
| P10.5 crx+ retina | TGACTGGCAG TGACTGGGAG (3) TTTAACTGAA
| 38.4 | 0.0384 |
| Adult retinal | AGAATGGCAG CAGGCAGGCA TCTGGTTTTA TGACTGGCAG TGACTGGGAG (3)
| 46.4 | 0.0464 |
| ONL | CAGGCAGGCA TGACTGGGAG (3) TTTAACTGAA TTTACTGGAA
| 45.9 | 0.0459 |