| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GTTGGTAAAT TCTCCAAAAA
| 3.2 | 0.0032 |
| Cb medulloblastoma | GTTGGTAAAT TGGAAGGCCA (4)
| 6.9 | 0.0069 |
| P8 GC+1d culture | ATAAGAAGAG (2) TCTCCAAAAA TGGAAGGCCA (4)
| 4.5 | 0.0045 |
| P8 GC+SHH+1d culture | GCACCCAAGC GTTGGTAAAT TCTCCAAAAA
| 8.3 | 0.0083 |
| 3T3 fibroblasts | AGTTCCCAGA (2) ATAAGAAGAG (2) GGAACCTTGG
| 14 | 0.014 |
| E15 cortex | GCACCCAAGC
| 4.9 | 0.0049 |
| Hypothalamus | GCACCCAAGC TCTCCAAAAA TGGAAGGCCA (4)
| 5.4 | 0.0054 |
| E12.5 retina | ATAAGAAGAG (2) CCTTTTATCC (2) GGAACCTTGG
| 9.5 | 0.0095 |
| E14.5 retina | ATAAGAAGAG (2) GCACCCAAGC GGAACCTTGG GTTGGTAAAT TCTCCAAAAA
| 14.5 | 0.0145 |
| E16.5 retina | CCTTTTATCC (2) GGAACCTTGG TCTCCAAAAA
| 9 | 0.009 |
| E18.5 retina | GGAACCTTGG GTTGGTAAAT TCTCCAAAAA
| 5.4 | 0.0054 |
| P0.5 retina | AGTTCCCAGA (2) ATAAGAAGAG (2) GTTGGTAAAT TCTCCAAAAA TGGAAGGCCA (4)
| 13.8 | 0.0138 |
| P2.5 retina | GGAACCTTGG TCTCCAAAAA
| 5.3 | 0.0053 |
| P4.5 retina | GGAACCTTGG GTTGGTAAAT TCTCCAAAAA
| 6 | 0.006 |
| P6.5 retina | CCTTTTATCC (2) GGAACCTTGG GTTGGTAAAT TCTCCAAAAA
| 8.4 | 0.0084 |
| P10.5 crx- retina | AGTTCCCAGA (2)
| 3.7 | 0.0037 |
| P10.5 crx+ retina | ATAAGAAGAG (2)
| 1.9 | 0.0019 |
| Adult retinal | CCTTTTATCC (2) TGGAAGGCCA (4)
| 3.8 | 0.0038 |
| ONL | CCTTTTATCC (2) GGAACCTTGG GTTGGTAAAT TCTCCAAAAA TGGAAGGCCA (4)
| 15.2 | 0.0152 |