Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.33908	Sfrs12	splicing factor, arginine/serine-rich 12	13		218543
Gene Ontology	mRNA processing | nuclear mRNA splicing, via spliceosome | nucleic acid binding | nucleus | spliceosome complex
Human Homolog	SFRS12[splicing factor, arginine/serine-rich 12]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 106 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGAGTTATG (2) AGTTTTTCTT GAGATTACAG GCCAAATTTG (4) GCCAACCTTG TAGCCTGGTC TGGTGGGTGC TGTGGGTTGG (3) 26 0.026 Cb medulloblastoma AGTTTTTCTT TGGTGGGTGC TTTTTTAAAA (3) 6.9 0.0069 P8 GC+1d culture AAGAGTTATG (2) AGTTTTTCTT GAGATTACAG GCCAAATTTG (4) GCCAACCTTG 17.1 0.0171 P8 GC+SHH+1d culture AAGAGTTATG (2) AGTTTTTCTT GAGATTACAG GCCAAATTTG (4) GCCAACCTTG TAGCCTGGTC TTTTTTAAAA (3) 15.2 0.0152 3T3 fibroblasts AGAAGGAGCG GAGATTACAG GCCAACCTTG TGGTGGGTGC TGTGGGTTGG (3) 24.5 0.0245 E15 cortex AGTTTTTCTT GCCAAATTTG (4) GCCAACCTTG TGGGAGGGCC 34.6 0.0346 P1 cortex TTGCTATGGT (2) 4.5 0.0045 Hypothalamus AAGAGTTATG (2) GAGATTACAG GCCAAATTTG (4) TGTGGGTTGG (3) 18 0.018 E12.5 retina AAGAGTTATG (2) AGTTTTTCTT GAGATTACAG GCCAAATTTG (4) GCCAACCTTG TGTGGGTTGG (3) 24.4 0.0244 E14.5 retina AAGAGTTATG (2) AGAAGGAGCG AGTTTTTCTT GAGATTACAG GCCAAATTTG (4) TGGGAGGGCC TGGTGGGTGC 30.9 0.0309 E16.5 retina GCCAAATTTG (4) GCCAACCTTG TGGTGGGTGC TTGCTATGGT (2) 10.8 0.0108 E18.5 retina AAGAGTTATG (2) AGTTTTTCTT GAGATTACAG GCCAAATTTG (4) TGTGGGTTGG (3) TTTTTTAAAA (3) 20 0.02 P0.5 retina AAGAGTTATG (2) GCCAAATTTG (4) GCCAACCTTG TGGTGGGTGC TGTGGGTTGG (3) 29.5 0.0295 P2.5 retina AAGAGTTATG (2) GAGATTACAG GCCAACCTTG TGTGGGTTGG (3) TTGCTATGGT (2) TTTTTTAAAA (3) 28.2 0.0282 P4.5 retina AAGAGTTATG (2) AGTTTTTCTT GAGATTACAG GCCAAATTTG (4) TGTGGGTTGG (3) 31.8 0.0318 P6.5 retina AAGAGTTATG (2) AGTTTTTCTT GAGATTACAG GCCAAATTTG (4) TAGCCTGGTC TGGGAGGGCC TGTGGGTTGG (3) TTGCTATGGT (2) 36.7 0.0367 P10.5 crx- retina AAGAGTTATG (2) AGTTTTTCTT GAGATTACAG GCCAAATTTG (4) TAGCCTGGTC TGGTGGGTGC 29.8 0.0298 P10.5 crx+ retina AAGAGTTATG (2) AGAAGGAGCG AGTTTTTCTT GAGATTACAG GCCAAATTTG (4) TGGTGGGTGC TGTGGGTTGG (3) 30.6 0.0306 Adult retinal AAGAGTTATG (2) GAGATTACAG GCCAAATTTG (4) GCCAACCTTG TGTGGGTTGG (3) TTGCTATGGT (2) 26.1 0.0261 ONL AAGAGTTATG (2) GCCAAATTTG (4) TGTGGGTTGG (3) 9.5 0.0095