Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3401	C430005N20Rik	RIKEN cDNA C430005N20 gene	19		78534
Mm.3401	Pcsk5	proprotein convertase subtilisin/kexin type 5	19	19 18.0 cM	18552
Gene Ontology	ATP binding | extracellular space | hydrolase activity | integral to membrane | membrane | peptidase activity | protein amino acid phosphorylation | proteolysis and peptidolysis | serine-type endopeptidase activity | subtilase activity | transmembrane receptor protein tyrosine kinase activity | transmembrane receptor protein tyrosine kinase signaling pathway
Human Homolog	PCSK5[proprotein convertase subtilisin/kexin type 5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 43 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTTCCTTTG 6.5 0.0065 Cb medulloblastoma ATTTCCTTTG GAAGAGGGAA (2) TAAAAAAATA TACAGTATTT (2) 11.5 0.0115 P8 GC+1d culture TACAGTATTT (2) TACATTCCAA (4) 5.7 0.0057 P8 GC+SHH+1d culture ATTTCCTTTG GAAGAGGGAA (2) 5.8 0.0058 E15 cortex ATTTCCTTTG 4.9 0.0049 P1 cortex ATTTCCTTTG TACATTCCAA (4) 9 0.009 Hypothalamus ATTTCCTTTG TACAGTATTT (2) 5.4 0.0054 E12.5 retina ATTTCCTTTG 5.6 0.0056 E14.5 retina ATTTCCTTTG TACAGTATTT (2) TTTGGCAGCA (2) 10.9 0.0109 E16.5 retina ATTTCCTTTG 1.8 0.0018 E18.5 retina ATTTCCTTTG TACAGTATTT (2) TTTGGCAGCA (2) 5.4 0.0054 P0.5 retina ATTTCCTTTG TAAAAAAATA TACAGTATTT (2) 9.9 0.0099 P2.5 retina TAAAAAAATA TACAGTATTT (2) TACATTCCAA (4) 5.4 0.0054 P4.5 retina ATTTCCTTTG TAAAAAAATA TACAGTATTT (2) 8 0.008 P6.5 retina TAAAAAAATA TACAGTATTT (2) 3.4 0.0034 P10.5 crx- retina ATTTCCTTTG TACAGTATTT (2) 7.4 0.0074 P10.5 crx+ retina GAAGAGGGAA (2) TACAGTATTT (2) 5.7 0.0057 Adult retinal ATTTCCTTTG TAAAAAAATA TACATTCCAA (4) 5.7 0.0057 ONL GAAGAGGGAA (2) TACAGTATTT (2) TTTGGCAGCA (2) 7.6 0.0076