| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GAAAAAAAAC (2) GCACATTGTT GGATTTGGCC (3) TTAAAAAAAG (2) TTGCCTCACT (3) TTTGAGGATT (2) TTTGTTGTAG
| 37.4 | 0.0374 |
| Cb medulloblastoma | AAGGCAAAAA (2) GAAAAAAAAC (2) TTGCCTCACT (3) TTTGAGGATT (2)
| 11.5 | 0.0115 |
| P8 GC+1d culture | GAAAAAAAAC (2) GGATTTGGCC (3) TTGCCTCACT (3)
| 13.6 | 0.0136 |
| P8 GC+SHH+1d culture | GAAAAAAAAC (2) GGATTTGGCC (3) TTAAAAAAAG (2) TTGCCTCACT (3) TTTGAGGATT (2)
| 18.8 | 0.0188 |
| 3T3 fibroblasts | GCACATTGTT GGATTTGGCC (3)
| 7 | 0.007 |
| E15 cortex | AAGGCAAAAA (2)
| 4.9 | 0.0049 |
| P1 cortex | AAGGCAAAAA (2) TTGCCTCACT (3)
| 9 | 0.009 |
| Hypothalamus | AAGGCAAAAA (2) TTAAAAAAAG (2) TTTGAGGATT (2)
| 7.2 | 0.0072 |
| E12.5 retina | GCACATTGTT GGATTTGGCC (3) TTGCCTCACT (3) TTTGTTGTAG
| 9.5 | 0.0095 |
| E14.5 retina | AAGGCAAAAA (2) GCACATTGTT GGATTTGGCC (3) TTTGAGGATT (2) TTTGTTGTAG
| 25.4 | 0.0254 |
| E16.5 retina | GCACATTGTT GGATTTGGCC (3) TTAAAAAAAG (2) TTGCCTCACT (3) TTTGAGGATT (2) TTTGTTGTAG
| 16.2 | 0.0162 |
| E18.5 retina | AAGGCAAAAA (2) GGATTTGGCC (3) TTGCCTCACT (3) TTTGAGGATT (2)
| 25.4 | 0.0254 |
| P0.5 retina | AAGGCAAAAA (2) GAAAAAAAAC (2) GCACATTGTT GGATTTGGCC (3) TTGCCTCACT (3)
| 15.9 | 0.0159 |
| P2.5 retina | AAGGCAAAAA (2) GAAAAAAAAC (2) GCACATTGTT TTAAAAAAAG (2) TTGCCTCACT (3) TTTGAGGATT (2) TTTGTTGTAG
| 21.2 | 0.0212 |
| P4.5 retina | GCACATTGTT TTAAAAAAAG (2) TTGCCTCACT (3)
| 13.9 | 0.0139 |
| P6.5 retina | GAAAAAAAAC (2) GGATTTGGCC (3) TTGCCTCACT (3) TTTGAGGATT (2)
| 13.3 | 0.0133 |
| P10.5 crx- retina | GGATTTGGCC (3) TTAAAAAAAG (2) TTGCCTCACT (3) TTTGAGGATT (2)
| 13 | 0.013 |
| P10.5 crx+ retina | GAAAAAAAAC (2) GCACATTGTT TTGCCTCACT (3) TTTGAGGATT (2)
| 13.4 | 0.0134 |
| Adult retinal | GCACATTGTT TTGCCTCACT (3)
| 3.8 | 0.0038 |
| ONL | GGATTTGGCC (3) TTAAAAAAAG (2) TTGCCTCACT (3) TTTGAGGATT (2)
| 36.3 | 0.0363 |