Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.34108	Rragd	Ras-related GTP binding D	4	4 11.4 cM	52187
Mm.34108	C030003H22Rik	RIKEN cDNA C030003H22 gene	4		100146
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 87 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGTTTTTGTT (2) CCTTTAATCC (3) GTTCCTTCCT TGAATTTTTG TTTTTTTTCC (3) TTTTTTTTTC (3) 83.2 0.0832 Cb medulloblastoma CCTTTAATCC (3) TGAATTTTTG TTTTTTTTCC (3) TTTTTTTTTC (3) 53.1 0.0531 P8 GC+1d culture CCTTTAATCC (3) GATTTGATAA GTTCCTTCCT TGAATTTTTG TTTTTTTTCC (3) 45.6 0.0456 P8 GC+SHH+1d culture CCTTTAATCC (3) TGAATTTTTG TTTGTGTGCC (2) TTTTTTTTCC (3) TTTTTTTTTC (3) 41.1 0.0411 3T3 fibroblasts CCTTTAATCC (3) TGAATTTTTG TTTTTTTTCC (3) 80.6 0.0806 E15 cortex CCTTTAATCC (3) 54.4 0.0544 P1 cortex AAGTCTTCGA (2) CCTTTAATCC (3) GTTCCTTCCT TTTTTTTTTC (3) 168 0.168 Hypothalamus AGTTTTTGTT (2) CCTTTAATCC (3) GATTTGATAA TTTGTGTGCC (2) TTTTTTTTCC (3) TTTTTTTTTC (3) 52.5 0.0525 E12.5 retina CCTTTAATCC (3) TTTTTTTTCC (3) TTTTTTTTTC (3) 78.9 0.0789 E14.5 retina AGTTTTTGTT (2) CCTTTAATCC (3) TTTGTGTGCC (2) TTTTTTTTCC (3) TTTTTTTTTC (3) 151.2 0.1512 E16.5 retina AGTTTTTGTT (2) CCTTTAATCC (3) GTTCCTTCCT TTTTTTTTCC (3) 117.7 0.1177 E18.5 retina AGTTTTTGTT (2) CCTTTAATCC (3) TGAATTTTTG TTTTTTTTCC (3) TTTTTTTTTC (3) 60 0.06 P0.5 retina AGTTTTTGTT (2) CCTTTAATCC (3) GTTCCTTCCT TTTGTGTGCC (2) TTTTTTTTCC (3) 82.5 0.0825 P2.5 retina AGTTTTTGTT (2) CCTTTAATCC (3) GTTCCTTCCT TTTTTTTTCC (3) TTTTTTTTTC (3) 82.8 0.0828 P4.5 retina AGTTTTTGTT (2) CCTTTAATCC (3) GATTTGATAA GTTCCTTCCT TTTTTTTTCC (3) TTTTTTTTTC (3) 67.4 0.0674 P6.5 retina CCTTTAATCC (3) TGAATTTTTG TTTGTGTGCC (2) TTTTTTTTCC (3) 76.7 0.0767 P10.5 crx- retina AAGTCTTCGA (2) AGTTTTTGTT (2) CCTTTAATCC (3) GTTCCTTCCT TTTGTGTGCC (2) 74.4 0.0744 P10.5 crx+ retina AGTTTTTGTT (2) CCTTTAATCC (3) GTTCCTTCCT TTTGTGTGCC (2) TTTTTTTTCC (3) 47.9 0.0479 Adult retinal CCTTTAATCC (3) GTTCCTTCCT TTTTTTTTCC (3) 135.2 0.1352 ONL CCTTTAATCC (3) TTTGTGTGCC (2) TTTTTTTTCC (3) 88.1 0.0881