Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.34199
3300001M20Rik
RIKEN cDNA 3300001M20 gene
2
66926
Gene Ontology
methyltransferase activity
|
transferase activity
Human Homolog
CGI-09[CGI-09 protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 35 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAGCAGGCTG (
2
)
GTGGGCAGTG (
2
)
TCTGCTGGTG
4.8
0.0048
P8 GC+1d culture
ACGGTGACTT
GCTTTTGTGG (
2
)
2.2
0.0022
P8 GC+SHH+1d culture
GCTTTTGTGG (
2
)
1.2
0.0012
E15 cortex
ACGGTGACTT
TCTGCTGGTG
9.8
0.0098
P1 cortex
TCTGCTGGTG
TTTTGGATTT
9
0.009
Hypothalamus
GCTTTTGTGG (
2
)
GTGGGCAGTG (
2
)
5.4
0.0054
E12.5 retina
GCTTTTGTGG (
2
)
GTGGGCAGTG (
2
)
7.6
0.0076
E14.5 retina
GCTTTTGTGG (
2
)
GTGGGCAGTG (
2
)
TCTGCTGGTG
5.4
0.0054
E16.5 retina
ACGGTGACTT
GTGGGCAGTG (
2
)
3.6
0.0036
E18.5 retina
GTGGGCAGTG (
2
)
1.8
0.0018
P0.5 retina
TCTGCTGGTG
2
0.002
P2.5 retina
GTGGGCAGTG (
2
)
TCTGCTGGTG
7
0.007
P4.5 retina
GCTTTTGTGG (
2
)
GTGGGCAGTG (
2
)
4
0.004
P6.5 retina
GCTTTTGTGG (
2
)
TTTTGGATTT
3.4
0.0034
P10.5 crx- retina
GTGGGCAGTG (
2
)
TCTGCTGGTG
5.6
0.0056
P10.5 crx+ retina
GCTTTTGTGG (
2
)
GTGGGCAGTG (
2
)
7.6
0.0076
Adult retinal
TCTGCTGGTG
3.7
0.0037
ONL
AAGCAGGCTG (
2
)
GCTTTTGTGG (
2
)
GTGGGCAGTG (
2
)
7.6
0.0076
