| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TGGTTTTGGG
| 6.5 | 0.0065 |
| Cb medulloblastoma | GGGGGAGGGG (4) TGGTTTTGGG
| 16.2 | 0.0162 |
| P8 GC+1d culture | CCACGTCATA GGGGACCCAG (3) GGGGGAGGGG (4) TGGTTTTGGG
| 23.9 | 0.0239 |
| P8 GC+SHH+1d culture | CCACGTCATA TGGTTTTGGG
| 16.4 | 0.0164 |
| 3T3 fibroblasts | CCACGTCATA GGGGGAGGGG (4) TGGTTTTGGG
| 17.5 | 0.0175 |
| E15 cortex | TGGTTTTGGG
| 9.9 | 0.0099 |
| P1 cortex | GGGGGAGGGG (4) TGGTTTTGGG
| 27.2 | 0.0272 |
| Hypothalamus | AGGGAACCAG (2) CCACGTCATA GGGGACCCAG (3) TGGTTTTGGG
| 18.1 | 0.0181 |
| E12.5 retina | CCACGTCATA GGGGGAGGGG (4) TGGTTTTGGG
| 24.5 | 0.0245 |
| E14.5 retina | TGGTTTTGGG
| 16.4 | 0.0164 |
| E16.5 retina | TCTGTGCCCC TGGTTTTGGG
| 12.7 | 0.0127 |
| E18.5 retina | CCACGTCATA GGGGGAGGGG (4) TGGTTTTGGG
| 27.2 | 0.0272 |
| P0.5 retina | TGGTTTTGGG
| 19.6 | 0.0196 |
| P2.5 retina | GGGGGAGGGG (4) TGGTTTTGGG
| 14.1 | 0.0141 |
| P4.5 retina | CCACGTCATA TGGTTTTGGG
| 19.8 | 0.0198 |
| P6.5 retina | GCCCTTCCTT GGGGGAGGGG (4) TGGTTTTGGG
| 28.3 | 0.0283 |
| P10.5 crx- retina | AGGGAACCAG (2) GGGGGAGGGG (4) TGGTTTTGGG
| 13.1 | 0.0131 |
| P10.5 crx+ retina | CCACGTCATA GGGGACCCAG (3) GGGGGAGGGG (4) TGGTTTTGGG
| 30.7 | 0.0307 |
| Adult retinal | GCCCTTCCTT GGGGGAGGGG (4) TGGTTTTGGG
| 14.9 | 0.0149 |
| ONL | TCTGTGCCCC TGGTTTTGGG
| 7.6 | 0.0076 |