| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AGGTCCACCA (3) CCATCACTGC CCCTCCAAGG GAAAGTTGGC (2) GCCTCCAAGG (5) GCCTTCCGTG (4) TTCCAGTATG (3) TTTGTATGGG TTTGTGATGG (4)
| 110.9 | 0.1109 |
| Cb medulloblastoma | AGGTCCACCA (3) CCATCACTGC GAAAGTTGGC (2) GAGAAGGCCG (3) GCCTCCAAGG (5) GCCTTCCGTG (4) TAGTTGAGGT (4) TTCCAGTATG (3) TTTGTGATGG (4)
| 198.6 | 0.1986 |
| P8 GC+1d culture | AGGTCCACCA (3) GAAAGTTGGC (2) GCCTCCAAGG (5) GCCTCCAGGG GCCTTCCGTG (4) GCTTCCAAGG (2) TTCCAGTATG (3) TTTGTATGGG TTTGTGATGG (4)
| 122 | 0.122 |
| P8 GC+SHH+1d culture | AGGTCCACCA (3) GAAAGTTGGC (2) GCCTACACTG (2) GCCTCCAAGG (5) GCCTTCCGTG (4) TAGTTGAGGT (4) TTTGTATGGG
| 169.8 | 0.1698 |
| 3T3 fibroblasts | GAAAGTTGGC (2) GCCTACACTG (2) GCCTCCAAGG (5) GCCTCCAGGG GCCTTCCGTG (4) GCTCCAAGGA (3)
| 480.1 | 0.4801 |
| E15 cortex | GAAAGTTGGC (2) GAGAAGGCCG (3) GCCTCCAAGG (5) TTCCAGTATG (3) TTTGTGATGG (4)
| 153.2 | 0.1532 |
| P1 cortex | GAAAGTTGGC (2) GCCTCCAAGG (5) GCTCCAAGGA (3)
| 131.7 | 0.1317 |
| Hypothalamus | AGGTCCACCA (3) CCAGTGAGCT (4) GAAAGTTGGC (2) GCCTCCAAGG (5) GCCTTCCGTG (4) TAGTTGAGGT (4) TTCCAGTATG (3) TTTGTGATGG (4)
| 130.3 | 0.1303 |
| E12.5 retina | CCAGTGAGCT (4) CCATCACTGC CTTCCGTGTT GCCTCCAAGG (5) TAGTTGAGGT (4) TTTGTGATGG (4)
| 257.2 | 0.2572 |
| E14.5 retina | AGGTCCACCA (3) CCATCACTGC GCCTCCAAGG (5) TTCCAGTATG (3) TTTGTATGGG TTTGTGATGG (4)
| 56.4 | 0.0564 |
| E16.5 retina | AGGTCCACCA (3) CCAGTGAGCT (4) CCATCACTGC GAGAAGGCCG (3) GCCTCCAAGG (5) GCCTTCCGTG (4) TTTGTATGGG TTTGTGATGG (4)
| 108.5 | 0.1085 |
| E18.5 retina | AGGTCCACCA (3) CCATCACTGC GCCTCCAAGG (5) TAGTTGAGGT (4) TTTGTATGGG TTTGTGATGG (4)
| 121.8 | 0.1218 |
| P0.5 retina | CCAGTGAGCT (4) CCATCACTGC GAAAGTTGGC (2) GCCTCCAAGG (5) GCCTTCCGTG (4) TTTGTATGGG
| 257.1 | 0.2571 |
| P2.5 retina | CTTCCGTGTT GAGAAGGCCG (3) GCCTCCAAGG (5) TTTGTATGGG
| 183.1 | 0.1831 |
| P4.5 retina | GAAAGTTGGC (2) GCCTCCAAGG (5) TAGTTGAGGT (4) TTCCAGTATG (3) TTTGTATGGG TTTGTGATGG (4)
| 107 | 0.107 |
| P6.5 retina | AGCATTCCCT AGGTCCACCA (3) CCATCACTGC GAAAGTTGGC (2) GCCTCCAAGG (5) GCCTCCAGGG TAGTTGAGGT (4)
| 170.1 | 0.1701 |
| P10.5 crx- retina | AGGTCCACCA (3) GCCTCCAAGG (5) GCCTTCCGTG (4) GCTTCCAAGG (2) TAGTTGAGGT (4) TTTGTATGGG TTTGTGATGG (4)
| 373.4 | 0.3734 |
| P10.5 crx+ retina | AGCATTCCCT AGGTCCACCA (3) CCATCACTGC CCCTCCAAGG GCCTACACTG (2) GCCTCCAAGG (5) TTCCAGTATG (3)
| 278.6 | 0.2786 |
| Adult retinal | AGCATTCCCT AGGTCCACCA (3) CCAGTGAGCT (4) CCATCACTGC CCCTCCAAGG CTTCCGTGTT GCCTCCAAGG (5) GCCTTCCGTG (4) GCTTCCAAGG (2) TAGTTGAGGT (4) TTTGTATGGG TTTGTGATGG (4)
| 363.2 | 0.3632 |
| ONL | AGGTCCACCA (3) GCCTCCAAGG (5) GCCTTCCGTG (4) GCTTCCAAGG (2) TTTGTATGGG
| 363.8 | 0.3638 |