Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.34346
Phlda3
pleckstrin homology-like domain, family A, member 3
1
1 75.0 cM
27280
Human Homolog
PHLDA3[pleckstrin homology-like domain, family A, member 3]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 30 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ATGAGGAAGA (
4
)
CTTATTCCAG
GAAGGAGCCA (
2
)
GCCCCCCTCT (
2
)
8.1
0.0081
Cb medulloblastoma
GCCCCCCTCT (
2
)
13.9
0.0139
P8 GC+1d culture
CTTATTCCAG
GAAGGAGCCA (
2
)
GCCCCCCTCT (
2
)
20.5
0.0205
P8 GC+SHH+1d culture
GAAGGAGCCA (
2
)
GCCCCCCTCT (
2
)
9.3
0.0093
3T3 fibroblasts
CTTATTCCAG
10.5
0.0105
E15 cortex
GCCCCCCTCT (
2
)
59.4
0.0594
P1 cortex
GCCCCCCTCT (
2
)
72.7
0.0727
Hypothalamus
ATGAGGAAGA (
4
)
CTTATTCCAG
GCCCCCCTCT (
2
)
21.7
0.0217
E14.5 retina
GAAGGAGCCA (
2
)
1.8
0.0018
E16.5 retina
CTTATTCCAG
1.8
0.0018
E18.5 retina
GCCCCCCTCT (
2
)
1.8
0.0018
P0.5 retina
GCCCCCCTCT (
2
)
3.9
0.0039
P2.5 retina
CTTATTCCAG
GCCCCCCTCT (
2
)
12.4
0.0124
P4.5 retina
GCCCCCCTCT (
2
)
13.9
0.0139
P6.5 retina
GAAGGAGCCA (
2
)
GCCCCCCTCT (
2
)
36.7
0.0367
P10.5 crx- retina
CTTATTCCAG
GCCCCCCTCT (
2
)
24.2
0.0242
P10.5 crx+ retina
GCCCCCCTCT (
2
)
28.8
0.0288
Adult retinal
GCCCCCCTCT (
2
)
53.7
0.0537
ONL
GCCCCCCTCT (
2
)
30.6
0.0306
