| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AACAGAAAAA CAAGCAAAAC (2) GCATAAATTG TTTTCTAGAG
| 14.7 | 0.0147 |
| Cb medulloblastoma | CAAGCAAAAC (2) GCATAAATTG
| 11.5 | 0.0115 |
| P8 GC+1d culture | CAAGCAAAAC (2) CAGAGCCTGA (2) GCATAAATTG
| 9.1 | 0.0091 |
| P8 GC+SHH+1d culture | CAAGCAAAAC (2) CAGAGCCTGA (2) GCATAAATTG TTTTCTAGAG
| 14.1 | 0.0141 |
| 3T3 fibroblasts | CAAGCAAAAC (2) CAGAGCCTGA (2) GCATAAATTG
| 10.5 | 0.0105 |
| E15 cortex | GCATAAATTG
| 9.9 | 0.0099 |
| P1 cortex | CAAGCAAAAC (2) CAGAGCCTGA (2) TTTTGGATTT
| 13.5 | 0.0135 |
| Hypothalamus | AACAAAATAA CAAGCAAAAC (2) CAGAGCCTGA (2) GCATAAATTG
| 10.8 | 0.0108 |
| E12.5 retina | GCATAAATTG
| 5.6 | 0.0056 |
| E14.5 retina | GCATAAATTG TTTTCTAGAG
| 7.3 | 0.0073 |
| E16.5 retina | CAGAGCCTGA (2) GCATAAATTG TTTTCTAGAG
| 14.5 | 0.0145 |
| E18.5 retina | AACAGAAAAA CAAGCAAAAC (2) GCATAAATTG
| 12.7 | 0.0127 |
| P0.5 retina | AACAGAAAAA CAAGCAAAAC (2) CAGAGCCTGA (2) GCATAAATTG
| 9.9 | 0.0099 |
| P2.5 retina | AACAGAAAAA CAAGCAAAAC (2)
| 5.3 | 0.0053 |
| P4.5 retina | CAAGCAAAAC (2) GCATAAATTG
| 13.9 | 0.0139 |
| P6.5 retina | AACAAAATAA CAGAGCCTGA (2) GCATAAATTG TTTTGGATTT
| 15.1 | 0.0151 |
| P10.5 crx- retina | AACAAAATAA GCATAAATTG
| 18.6 | 0.0186 |
| P10.5 crx+ retina | CAAGCAAAAC (2) CAGAGCCTGA (2) GCATAAATTG
| 7.6 | 0.0076 |
| Adult retinal | CAAGCAAAAC (2) CAGAGCCTGA (2) GCATAAATTG
| 14.9 | 0.0149 |
| ONL | AACAAAATAA CAAGCAAAAC (2) CAGAGCCTGA (2) GCATAAATTG
| 15.3 | 0.0153 |