Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.34405	Casp3	caspase 3, apoptosis related cysteine protease	8	8 26.0 cM	12367
Gene Ontology	apoptosis | B-cell homeostasis | caspase activity | caspase activity | cell fate commitment | cyclin-dependent protein kinase inhibitor activity | cysteine-type peptidase activity | cytoplasm | hydrolase activity | induction of apoptosis | induction of apoptosis | induction of apoptosis | induction of apoptosis by oxidative stress | induction of apoptosis via death domain receptors | keratinocyte differentiation | negative regulation of activated T-cell proliferation | negative regulation of B-cell proliferation | negative regulation of CDK activity | negative regulation of cell cycle | peptidase activity | peptidase activity | proteolysis and peptidolysis | response to wounding | T-cell homeostasis
Human Homolog	CASP3[caspase 3, apoptosis-related cysteine protease]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 44 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CATTATAGCT TGACAATTTT (2) TTTTATTACT 16.4 0.0164 Cb medulloblastoma TGACAATTTT (2) 2.3 0.0023 P8 GC+1d culture TGACAATTTT (2) TTTTATTACT 22.8 0.0228 P8 GC+SHH+1d culture CATTATAGCT CTGACTTTTC (2) TGACAATTTT (2) TTTTATTACT 33.9 0.0339 E15 cortex CTGACTTTTC (2) CTGGAAGCTG TGACAATTTT (2) 59.3 0.0593 P1 cortex TGACAATTTT (2) 18.2 0.0182 Hypothalamus CTGGAAGCTG GGCCTGAAAT (2) GGGATGAAGG TGACAATTTT (2) 12.6 0.0126 E12.5 retina TGACAATTTT (2) TTTTATTACT 7.5 0.0075 E14.5 retina TGACAATTTT (2) 12.8 0.0128 E16.5 retina CATTATAGCT GGCCTGAAAT (2) TGACAATTTT (2) 23.5 0.0235 E18.5 retina TGACAATTTT (2) TTTTATTACT 34.5 0.0345 P0.5 retina TGACAATTTT (2) 17.7 0.0177 P2.5 retina CATTATAGCT CTGGAAGCTG GGCCTGAAAT (2) TGACAATTTT (2) TTTTATTACT 23 0.023 P4.5 retina TGACAATTTT (2) 19.8 0.0198 P6.5 retina CATTATAGCT GGCCTGAAAT (2) GGGATGAAGG TGACAATTTT (2) TTTTATTACT 16.8 0.0168 P10.5 crx- retina GGGATGAAGG TGACAATTTT (2) 14.8 0.0148 P10.5 crx+ retina TGACAATTTT (2) 3.8 0.0038 Adult retinal CTGACTTTTC (2) TGACAATTTT (2) 3.8 0.0038 ONL CTGACTTTTC (2) 1.9 0.0019