Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.34420	BC067047	cDNA sequence BC067047	2		277360
Human Homolog	PREX1[phosphatidylinositol 3,4,5-trisphosphate-dependent RAC exchanger 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATAGATTTTT CCTCCTGCCC (3) CTCCCTGCCC (3) TTTTATTTTT (3) 8.1 0.0081 Cb medulloblastoma ATAGATTTTT CTCCCTGCCC (3) CTGGAGGACA (3) TTTTATTTTT (3) 13.8 0.0138 P8 GC+1d culture ATAGATTTTT CCTCCTGCCC (3) CCTTCTCAAC CTCCCTGCCC (3) CTGGAGGACA (3) TTTTATTTTT (3) 19.3 0.0193 P8 GC+SHH+1d culture AGGTTAGGGC ATAGATTTTT CCTTCTCAAC CTCCCTGCCC (3) TTTTATTTTT (3) 25.9 0.0259 3T3 fibroblasts CTCCCTGCCC (3) 7 0.007 E15 cortex CCTCCTGCCC (3) CCTTCTCAAC CTCCCTGCCC (3) 29.6 0.0296 P1 cortex CTCCCTGCCC (3) 9.1 0.0091 Hypothalamus AGGTTAGGGC CCTCCTGCCC (3) CCTTCTCAAC CTGGAGGACA (3) TTTTATTTTT (3) 10.8 0.0108 E12.5 retina ATAGATTTTT CCTCCTGCCC (3) CCTTCTCAAC CTCCCTGCCC (3) TTTTATTTTT (3) 26.3 0.0263 E14.5 retina AGGTTAGGGC ATAGATTTTT CCTTCTCAAC CTGGAGGACA (3) TTTTATTTTT (3) 19.9 0.0199 E16.5 retina ATAGATTTTT CCTTCTCAAC CTCCCTGCCC (3) CTGGAGGACA (3) TTTTATTTTT (3) 27.1 0.0271 E18.5 retina AGGTTAGGGC ATAGATTTTT CCTTCTCAAC CTCCCTGCCC (3) CTGGAGGACA (3) TTTTATTTTT (3) 27.2 0.0272 P0.5 retina CCTCCTGCCC (3) CCTTCTCAAC CTCCCTGCCC (3) TTTTATTTTT (3) 19.8 0.0198 P2.5 retina ATAGATTTTT CTCCCTGCCC (3) CTGGAGGACA (3) TTTTATTTTT (3) 15.9 0.0159 P4.5 retina AGGTTAGGGC ATAGATTTTT CTCCCTGCCC (3) TTTTATTTTT (3) 15.8 0.0158 P6.5 retina AGGTTAGGGC CCTTCTCAAC CTCCCTGCCC (3) TTTTATTTTT (3) 13.4 0.0134 P10.5 crx- retina CTCCCTGCCC (3) CTGGAGGACA (3) TTTTATTTTT (3) 11.2 0.0112 P10.5 crx+ retina CCTCCTGCCC (3) CTCCCTGCCC (3) TTTTATTTTT (3) 9.6 0.0096 Adult retinal CAGCTCAGGA (2) CTCCCTGCCC (3) 9.3 0.0093 ONL ATAGATTTTT CTCCCTGCCC (3) TTTTATTTTT (3) 7.6 0.0076