Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.34428	Pias4	protein inhibitor of activated STAT, 4	10		59004
Gene Ontology	development | DNA binding | DNA binding | JAK-STAT cascade | negative regulation of transcription from Pol II promoter | nuclear matrix | nucleus | protein binding | protein sumoylation | regulation of transcription, DNA-dependent | SUMO ligase activity | transcription corepressor activity | transcription corepressor activity | zinc ion binding
Human Homolog	PIAS4[protein inhibitor of activated STAT, 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 53 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GACAAAAAAA GAGAATGGCA (2) GCGTCCAATC 16.3 0.0163 Cb medulloblastoma AACTCGCCGG GACAAAAAAA GAGAATGGCA (2) 37 0.037 P8 GC+1d culture AACTCGCCGG GACAAAAAAA GAGAATGGCA (2) 18.2 0.0182 P8 GC+SHH+1d culture AACTCGCCGG GACAAAAAAA GAGAATGGCA (2) GCGTCCAATC 11.8 0.0118 3T3 fibroblasts GCGTCCAATC 3.5 0.0035 E15 cortex AACTCGCCGG GCGTCCAATC 24.7 0.0247 P1 cortex GACAAAAAAA GCGTCCAATC 9 0.009 Hypothalamus GACAAAAAAA GAGAATGGCA (2) 21.7 0.0217 E12.5 retina GACAAAAAAA GAGAATGGCA (2) 3.8 0.0038 E14.5 retina AACTCGCCGG GACAAAAAAA GAGAATGGCA (2) GCGTCCAATC 12.7 0.0127 E16.5 retina GAGAATGGCA (2) 5.4 0.0054 E18.5 retina AACTCGCCGG GACAAAAAAA GAGAATGGCA (2) GCGTCCAATC 20 0.02 P0.5 retina GAGAATGGCA (2) 9.8 0.0098 P2.5 retina AACTCGCCGG GAGAATGGCA (2) 14.1 0.0141 P4.5 retina GACAAAAAAA GAGAATGGCA (2) GCGTCCAATC 17.9 0.0179 P6.5 retina AACTCGCCGG GACAAAAAAA GAGAATGGCA (2) 16.7 0.0167 P10.5 crx- retina AACTCGCCGG GAGAATGGCA (2) GCGTCCAATC 20.5 0.0205 P10.5 crx+ retina GACAAAAAAA GAGAATGGCA (2) GCGTCCAATC 9.5 0.0095 Adult retinal AACTCGCCGG GACAAAAAAA GAGAATGGCA (2) GCGTCCAATC 15 0.015 ONL AACTCGCCGG GACAAAAAAA GAGAATGGCA (2) 15.2 0.0152