Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3464	Flt1	FMS-like tyrosine kinase 1	5	5 82.0 cM	14254
Gene Ontology	angiogenesis | ATP binding | extracellular space | integral to membrane | kinase activity | membrane | patterning of blood vessels | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | receptor activity | transferase activity | transmembrane receptor protein tyrosine kinase activity | transmembrane receptor protein tyrosine kinase signaling pathway | vascular endothelial growth factor receptor activity
Human Homolog	FLT1[fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 76 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAGAAAAA (3) AAAGTGAAGG AAGAGAAAGA (5) GAAACAGAAA 14.7 0.0147 Cb medulloblastoma AAAAGAAAAA (3) AAAGTGAAGG AAGAGAAAGA (5) GTCAGCTGCT 27.7 0.0277 P8 GC+1d culture AAAAGAAAAA (3) AAAGTGAAGG AAGAGAAAGA (5) ATGAATGTAT 12.4 0.0124 P8 GC+SHH+1d culture AAAAGAAAAA (3) AAAGTGAAGG AAGAGAAAGA (5) GGCTCCGGTC GTCAGCTGCT 17.5 0.0175 3T3 fibroblasts GGCTCCGGTC 3.5 0.0035 E15 cortex AAAGTGAAGG GTCAGCTGCT 9.8 0.0098 P1 cortex AAGAGAAAGA (5) 4.5 0.0045 Hypothalamus AAAGTGAAGG AAGAGAAAGA (5) GTCAGCTGCT 21.7 0.0217 E12.5 retina AAAGTGAAGG AAGAGAAAGA (5) GAAACAGAAA GGCTCCGGTC GTCAGCTGCT 18.8 0.0188 E14.5 retina AAAGTGAAGG AAGAGAAAGA (5) GAAACAGAAA GGCTCCGGTC GTCAGCTGCT 31 0.031 E16.5 retina AAGAGAAAGA (5) GGCTCCGGTC GTCAGCTGCT 5.4 0.0054 E18.5 retina AAAAGAAAAA (3) AAAGTGAAGG AAGAGAAAGA (5) GAAACAGAAA GGAAGACAGG GGCTCCGGTC 32.8 0.0328 P0.5 retina AAAGTGAAGG GGCTCCGGTC 9.9 0.0099 P2.5 retina AAAAGAAAAA (3) AAAGTGAAGG AAGAGAAAGA (5) GGCTCCGGTC 17.6 0.0176 P4.5 retina AAAAGAAAAA (3) AAAGTGAAGG AAGAGAAAGA (5) GGCTCCGGTC 21.8 0.0218 P6.5 retina AAAGTGAAGG AAGAGAAAGA (5) GAAACAGAAA GGCTCCGGTC 15 0.015 P10.5 crx- retina AAAAGAAAAA (3) AAAGTGAAGG AAGAGAAAGA (5) GGAAGACAGG 24.2 0.0242 P10.5 crx+ retina AAAAGAAAAA (3) AAAGTGAAGG AAGAGAAAGA (5) ATGAATGTAT 36.5 0.0365 Adult retinal AAAAGAAAAA (3) AAAGTGAAGG AAGAGAAAGA (5) ATGAATGTAT GAAACAGAAA 13.2 0.0132 ONL AAAAGAAAAA (3) AAAGTGAAGG AAGAGAAAGA (5) AGAGAAAGAA (2) GAAACAGAAA GGAAGACAGG 40.1 0.0401